Gene omics information

Query gene ID Gma.17975.2.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8392.5Gma.17975.2.S1_atBQ628976--2e-29At3g50530CRK (CDPK-related kinase)S.X.H.G.
0.5071.7GmaAffx.71343.1.S1_atBE555273--1e-16At5g38880unknown proteinS.X.H.G.
0.3346.1Gma.10528.1.S1_atBM270365--6e-25At1g71350eukaryotic translation initiation factor SUI1 family proteinS.X.H.G.
0.1822.3Gma.6053.1.S1_atCA852593--1e-23At3g17330ECT6 (evolutionarily conserved C-terminal region 6)S.X.H.G.
0.1114.2GmaAffx.63439.1.S1_atBQ628576--3e-34At1g01510AN (ANGUSTIFOLIA)S.X.H.G.
0.1013.0Gma.4932.1.S1_atBI970670NDX1 homeobox protein-2e-5At4g03090sequence-specific DNA binding / transcription factorS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.499.3GSM209591mock_0hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
9.499.2GSM201120Laser capture microdissected (LCM) seed coat hourglass at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
6.798.7GSM184829Whole Seed at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stage
6.698.7GSM191078Soybean_Cotyledon_SUS2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
6.698.7GSM267288Axillary meristem from 10-day-old soybean seedlings repliacte 2GSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristem
6.498.6GSM147954Laser capture microdissected (LCM) outer integument at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stage
6.198.5GSM258503Soybean shoot apical meristem, 2 short-day replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
5.698.3GSM209587resistant_24hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
5.498.2GSM258502Vegetative shoot apical meristem, replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
5.098.0GSM258505Soybean shoot apical meristem, 6 short-day replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9803255Gma.17975.2.S1_a_atBQ628976--2e-29At3g50530CRK (CDPK-related kinase)C.G.S.X.
0.475e-111402Gma.17975.1.A1_atCD398272--3e-4At3g50530CRK (CDPK-related kinase)C.G.S.X.
0.161e-25119GmaAffx.85393.1.S1_atBI893810--2e-29At3g56760calcium-dependent protein kinase, putative / CDPK, putativeC.G.S.X.
0.061e-965GmaAffx.13005.1.A1_atBU548292--5e+0At3g13480unknown proteinC.G.S.X.
0.038e-550GmaAffx.17383.1.S1_atAW703644--9e-2At2g41140CRK1 (CDPK-RELATED KINASE 1)C.G.S.X.
0.071e-346Gma.16177.1.A1_atAI938019--1e-21At3g50530CRK (CDPK-related kinase)C.G.S.X.
0.025e-344Gma.8111.1.S1_atU69174.1calmodulin-like domain protein kinase isoenzyme gamma-3e-57At3g20410CPK9 (calmodulin-domain protein kinase 9)C.G.S.X.
0.028e-240GmaAffx.78454.1.S1_atBQ080975--1e-2At5g23580CDPK9 (CALMODULIN-LIKE DOMAIN PROTEIN KINASE 9)C.G.S.X.
0.023e-138GmaAffx.55908.1.S1_atBQ610529--3e+0At5g47175LCR3 (Low-molecular-weight cysteine-rich 3)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.332e-29131Arabidopsis thalianaAt3g50530824217CRK (CDPK-related kinase)CDPK-related kinase---C.G.S.X.
0.138e-1271Hordeum vulgareContig16466_atContig16466--4e-15At2g46700calcium-dependent protein kinase, putative / CDPK, putativeC.G.S.X.
0.172e-24115Oryza sativaOs07g0619800AK121343.1-CDPK-related protein kinase (EC 2.7.1.-) (PK421)8e-48At3g50530CRK (CDPK-related kinase)C.G.S.X.
0.315e-37157Populus trichocarpaPtpAffx.92888.1.S1_s_atAI166960hypothetical protein-7e-42At3g50530CRK (CDPK-related kinase)C.G.S.X.
0.093e-1687Triticum aestivumTa.17648.1.S1_atCA623067--4e-20At2g46700calcium-dependent protein kinase, putative / CDPK, putativeC.G.S.X.
0.093e-756Vitis vinifera1610570_atCA807939hypothetical protein LOC100246879-2e-24At5g24430calcium-dependent protein kinase, putative / CDPK, putativeC.G.S.X.
0.195e-1995Zea maysZm.14134.1.A1_atCK985750CDPK-related protein kinase-1e-18At3g50530CRK (CDPK-related kinase)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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