Gene omics information

Query gene ID Gma.17925.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4867.7Gma.17925.1.S1_atBM270546--2e-2At3g29575AFP3 (ABI FIVE BINDING PROTEIN 3)S.X.H.G.
0.4259.3GmaAffx.44856.1.A1_atBE824220--7e-1At2g41170F-box family proteinS.X.H.G.
0.3548.6Gma.2326.1.S1_atCD402840--4e-20At3g27740CARA (CARBAMOYL PHOSPHATE SYNTHETASE A)S.X.H.G.
0.3346.1GmaAffx.3847.1.A1_s_atBE823774transcription factor bZIP38-1e+1At5g26692-S.X.H.G.
0.3243.7GmaAffx.12075.1.S1_atCA802446--1e-5At1g06210VHS domain-containing protein / GAT domain-containing proteinS.X.H.G.
0.2735.7Gma.10015.1.S1_atBI469759--4e+0At4g30460glycine-rich proteinS.X.H.G.
0.2633.9GmaAffx.87226.1.S1_atBI423956--5e-4At5g04560DME (DEMETER)S.X.H.G.
0.2025.1Gma.2298.1.S1_atBU545441--3e-4At1g49400emb1129 (embryo defective 1129)S.X.H.G.
0.1518.7GmaAffx.56989.1.S1_atBE657180--2e+0At4g34135UGT73B2 (UDP-GLUCOSYLTRANSFERASE 73B2)S.X.H.G.
0.1518.7Gma.3906.1.S1_atBU544368--1e-4At5g63460SAP domain-containing proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
59.499.9GSM147935Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stage
41.199.9GSM191078Soybean_Cotyledon_SUS2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
26.799.8GSM201103Laser capture microdissected (LCM) axis root meristem at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
24.299.8GSM191077Soybean_Cotyledon_SUS1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
21.599.8GSM201099Laser capture microdissected (LCM) axis plumule at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
20.399.7GSM201098Laser capture microdissected (LCM) axis plumule at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
17.499.7GSM201105Laser capture microdissected (LCM) axis shoot meristem at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
16.799.7GSM309346transgenic RNAiOleosin, biol rep 2, tech rep 2GSE12300Suppression of oleosin in soybean cotyledon
16.199.6GSM201111Laser capture microdissected (LCM) cotyledon abaxial parenchyma at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
14.999.6GSM309344transgenic RNAiOleosin, biol rep 1, tech rep 2GSE12300Suppression of oleosin in soybean cotyledon
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.702e-163575Gma.7298.1.S1_s_atBG156412--1e-7At3g29575AFP3 (ABI FIVE BINDING PROTEIN 3)C.G.S.X.
0.078e-652GmaAffx.57432.1.S1_atBE657443--1e+1At5g51812unknown proteinC.G.S.X.
0.081e-138GmaAffx.64794.1.S1_atCA801749--4e-6At1g13740AFP2 (ABI FIVE BINDING PROTEIN 2)C.G.S.X.
0.015e-136PsAffx.C30000087_s_atPsAffx.C30000087--5e+0At5g07430pectinesterase family proteinC.G.S.X.
0.032e+034GmaAffx.62050.1.S1_atAW307325--2e-1At5g18890inosine-uridine preferring nucleoside hydrolase family proteinC.G.S.X.
0.032e+034Gma.16910.1.S1_atBU549219--3e-1At1g12440zinc finger (AN1-like) family proteinC.G.S.X.
0.022e+034Gma.13036.1.S1_atCD393069inducer of CBF expression 1 /// inducer of CBF expression 4-1e-23At3g26744ICE1 (INDUCER OF CBF EXPRESSION 1)C.G.S.X.
0.032e+034Gma.12803.1.A1_atBE473607--1e+0At5g22940F8H (FRA8 HOMOLOG)C.G.S.X.
0.027e+032PsAffx.CL206Contig1_atPsAffx.CL206Contig1--4e-5At5g05470EIF2 ALPHAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.132e-240Arabidopsis thalianaAt3g29575822619AFP3 (ABI FIVE BINDING PROTEIN 3)F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POM---C.G.S.X.
0.033e+032Hordeum vulgareHVSMEc0019O14f_atHVSMEc0019O14f--5e+0At5g07960unknown proteinC.G.S.X.
0.082e-138Oryza sativaOs07g06029009635.m04117-Conserved hypothetical protein5e-1At1g54830NF-YC3 (NUCLEAR FACTOR Y, SUBUNIT C3)C.G.S.X.
0.154e-1789Populus trichocarpaPtpAffx.50616.1.A1_atCV239482hypothetical protein-1e-10At3g29575AFP3 (ABI FIVE BINDING PROTEIN 3)C.G.S.X.
0.035e+032Triticum aestivumTaAffx.38212.1.S1_atBJ244700--1e-6At1g80660AHA9C.G.S.X.
0.034e-134Vitis vinifera1617667_atCF213861--1e+0At4g18510CLE2 (CLAVATA3/ESR-RELATED)C.G.S.X.
0.061e-550Zea maysZm.17814.1.S1_atCD446349UPF0737 protein 1-6e-1At5g14110unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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