CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Gma.17796.1.S1_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 86.1 Gma.17796.1.S1_at BF597710 - - 7e-21 At5g27970 binding S.X. H.G.
0.27 35.7 GmaAffx.87050.1.S1_at BG238860 - - 4e-13 At5g27540 MIRO1 (Miro-related GTP-ase 1) S.X. H.G.
0.17 21.2 Gma.17425.1.S1_at CF922061 - - 3e-69 At3g08550 KOB1 (KOBITO) S.X. H.G.
0.14 17.5 GmaAffx.87028.1.S1_at BE330469 - - 2e-46 At1g52360 coatomer protein complex, subunit beta 2 (beta prime), putative S.X. H.G.
0.12 15.1 GmaAffx.74999.1.S1_at CB063650 - - 5e-74 At2g42500 PP2A-4 S.X. H.G.
0.03 5.8 GmaAffx.90824.1.S1_s_at CF806549 - - 3e-84 At1g04810 26S proteasome regulatory subunit, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.1 98.1 GSM293595 26_2077.2B.R246U, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.7 97.8 GSM292921 93_1448.1L.R273P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.6 97.7 GSM294338 86_2414.2I.R259P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1 97.3 GSM244831 22_SLO.M5W3.CEL, Experimental replicate 3 GSE9687 Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
4.1 97.3 GSM171604 11_Y.L.M.3, Experimental replicate Y GSE7124 Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
4.1 97.3 GSM294201 53_2352.2H.R194P_new, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.0 97.2 GSM258496 Vegetative soybean shoot apical meristem GSE10251 Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
4.0 97.2 GSM294215 66_2348.2H.R145P_new, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.0 97.2 GSM294209 60_2363.2H.R155L_new, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9 97.1 GSM244845 25_VP9.M2W3.CEL, Experimental replicate 3 GSE9687 Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.47 9e-157 553 GmaAffx.90807.1.S1_at CF806532 - - 3e-1 At1g60170 emb1220 (embryo defective 1220) C.G. S.X.
0.03 2e+0 34 GmaAffx.51613.1.S1_at BU091053 - - 3e+0 At4g23690 disease resistance-responsive family protein / dirigent family protein C.G. S.X.
0.01 8e+0 32 PsAffx.C79000054_at PsAffx.C79000054 - - 2e+1 At5g10880 tRNA synthetase-related / tRNA ligase-related C.G. S.X.
0.00 8e+0 32 PsAffx.C58000012_at PsAffx.C58000012 - - 2e+0 At1g21327 unknown protein C.G. S.X.
0.00 8e+0 32 PsAffx.C55000039_at PsAffx.C55000039 - - 3e-1 At1g77370 glutaredoxin, putative C.G. S.X.
0.00 8e+0 32 PsAffx.C55000039_s_at PsAffx.C55000039 - - 3e-1 At1g77370 glutaredoxin, putative C.G. S.X.
0.01 8e+0 32 PsAffx.C26000044_at PsAffx.C26000044 - - 5e-1 At1g09140 SF2/ASF-like splicing modulator (SRP30) C.G. S.X.
0.01 8e+0 32 PsAffx.C224000008_at PsAffx.C224000008 - - 2e+0 At2g34010 unknown protein C.G. S.X.
0.01 8e+0 32 PsAffx.C17000034_at PsAffx.C17000034 - - 1e+0 At3g48800 sterile alpha motif (SAM) domain-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 7e-21 101 Arabidopsis thaliana At5g27970 832867 binding F:binding;P:biological_process unknown;C:cellular_component unknown;MFOPB - - - C.G. S.X.
0.03 3e+0 32 Hordeum vulgare baak13l10_s_at baak13l10 - - 1e+0 At1g71470 unknown protein C.G. S.X.
0.03 1e+1 32 Oryza sativa OsAffx.28133.1.S1_at - - - 0 C.G. S.X.
0.12 2e-6 54 Populus trichocarpa PtpAffx.128147.1.A1_a_at CV226457 hypothetical protein - 2e+0 At2g27570 sulfotransferase family protein C.G. S.X.
0.05 4e-1 36 Triticum aestivum TaAffx.133323.1.S1_at BJ235784 - - 3e-1 At5g42655 - C.G. S.X.
0.03 4e-1 34 Vitis vinifera 1620876_at CB350001 - - 4e-3 At2g05840 PAA2 (20S PROTEASOME SUBUNIT PAA2) C.G. S.X.
0.03 2e+0 32 Zea mays ZmAffx.787.1.A1_at AI759109 EMB1417 - 5e-2 At3g53820 zinc finger (C2H2 type) family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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