Gene omics information

Query gene ID Gma.17760.1.S1_at
Gene name VHS and GAT domain protein
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5678.2Gma.17760.1.S1_atAW471993VHS and GAT domain protein-4e-2At1g20470auxin-responsive family proteinS.X.H.G.
0.7388.9Gma.7774.1.S1_atCD401719--1e-26At3g105403-phosphoinositide-dependent protein kinase, putativeS.X.H.G.
0.7187.8Gma.15367.1.S1_atCD412241--7e-60At3g59910-S.X.H.G.
0.6080.7GmaAffx.22311.1.S1_atBU547703--9e-1At1g58055-S.X.H.G.
0.5678.2Gma.1913.1.S1_atBI970928--0At2g37620ACT1 (ACTIN 1)S.X.H.G.
0.5071.7Gma.2135.1.S1_a_atBE660424--7e-1At3g26400EIF4B1S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
125.7100.0GSM308556Mature Soybean (Glycine max) pollen grains replicate 1GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
123.8100.0GSM308559Mature Soybean (Glycine max) pollen grains Replicate 2GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
122.4100.0GSM308560Mature Soybean (Glycine max) pollen grains Replicate 3GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
13.499.5GSM201121Laser capture microdissected (LCM) seed coat hourglass at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
11.099.4GSM201123Laser capture microdissected (LCM) seed coat hilum at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
8.399.1GSM147935Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stage
7.899.0GSM201107Laser capture microdissected (LCM) axis vascular bundle at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
7.698.9GSM201120Laser capture microdissected (LCM) seed coat hourglass at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
7.398.9GSM191085Soybean_Cotyledon_HI1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
6.598.7GSM201117Laser capture microdissected (LCM) cotyledon vascular bundle at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.500666Gma.17259.1.A1_atAW310573VHS and GAT domain protein-3e+0At2g47950unknown proteinC.G.S.X.
0.412e-26121Gma.4776.1.S1_atAW310492--7e+0At4g00100ATRPS13A (ARABIDOPSIS THALIANA RIBOSOMAL PROTEIN S13A)C.G.S.X.
0.025e-240PsAffx.CL1438Contig1_atPsAffx.CL1438Contig1--4e-2At5g62090-C.G.S.X.
0.025e-240GmaAffx.57832.1.S1_atAW757014--4e-3At5g01881unknown proteinC.G.S.X.
0.002e-138PsAffx.C219000006_atPsAffx.C219000006--4e-3At1g02840SR1C.G.S.X.
0.022e-138GmaAffx.91070.1.S1_atCF806795--1e+0At3g26900shikimate kinase family proteinC.G.S.X.
0.022e-138GmaAffx.55244.2.S1_atBI893826--1e-3At5g49700DNA-binding protein-relatedC.G.S.X.
0.022e-138GmaAffx.51957.1.S1_s_atCA785233--2e-5At3g54680proteophosphoglycan-relatedC.G.S.X.
0.022e-138GmaAffx.29509.1.S1_atCA938785--1e-24At2g30110ATUBA1C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.024e-240Arabidopsis thalianaAt1g20470838635auxin-responsive family proteinF:molecular_function unknown;P:response to auxin stimulus;C:cellular_component unknown;PO---C.G.S.X.
0.023e-136Hordeum vulgareContig24281_atContig24281--6e-2At1g18750AGL65 (AGAMOUS-LIKE 65)C.G.S.X.
0.021e+036Oryza sativaOsAffx.23085.1.S1_at---0C.G.S.X.
0.101e-1275Populus trichocarpaPtpAffx.653.19.A1_atCV259543hypothetical protein-4e-4At4g32760protein transporterC.G.S.X.
0.032e-138Triticum aestivumTaAffx.81595.1.S1_atCA684192--1e+0At5g61610-C.G.S.X.
0.055e-1787Vitis vinifera1607917_atCB008361hypothetical protein LOC100249280-1e+0At5g07560GRP20 (GLYCINE-RICH PROTEIN 20)C.G.S.X.
0.027e-238Zea maysZm.4599.1.A1_atBM078509hypothetical protein LOC100192691-4e+0At3g22183unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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