Gene omics information

Query gene ID Gma.17713.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6181.8Gma.17713.1.S1_atBG156677--1e-63At4g32530vacuolar ATP synthase, putative / V-ATPase, putativeS.X.H.G.
0.6181.8GmaAffx.8929.1.S1_atBG551351--1e-24At3g49100signal recognition particle 9 kDa protein, putative / SRP9, putativeS.X.H.G.
0.5576.3Gma.7259.2.S1_atBQ610944--7e+0At5g45428CPuORF24 (Conserved peptide upstream open reading frame 24)S.X.H.G.
0.5071.7GmaAffx.56409.1.S1_atBU965321--1e-16At1g08750GPI-anchor transamidase, putativeS.X.H.G.
0.4968.3GmaAffx.87924.1.S1_atAW596893--9e-39At3g05000transport protein particle (TRAPP) component Bet3 family proteinS.X.H.G.
0.4867.7Gma.16051.1.S1_atCD398111--6e-25At3g04780-S.X.H.G.
0.4463.3GmaAffx.1729.2.S1_atBG726769--2e-42At4g35410clathrin adaptor complex small chain family proteinS.X.H.G.
0.4259.3Gma.3820.3.S1_a_atBI968156--3e-3At1g30230elongation factor 1-beta / EF-1-betaS.X.H.G.
0.4057.1GmaAffx.18993.1.S1_atBF597943--2e-60At1g17470ATDRG1 (ARABIDOPSIS THALIANA DEVELOPMENTALLY REGULATED G-PROTEIN 1)S.X.H.G.
0.4057.1Gma.17905.2.S1_atCD393233--8e-37At4g01320ATSTE24S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
3.696.7GSM308560Mature Soybean (Glycine max) pollen grains Replicate 3GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
3.396.2GSM308559Mature Soybean (Glycine max) pollen grains Replicate 2GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
3.296.0GSM170928V2 Control, biological rep3GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
2.594.2GSM29329275_1530.1P.R005P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.594.2GSM29330789_1202.1P.R124P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.493.8GSM29349110_3002.2A.SLA1P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.493.8GSM209598resistant_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
2.393.3GSM209597susceptible_24hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
2.393.3GSM2934909_1610.1R.R021P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.393.3GSM29353954_3007.2A.SLA2U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.454e-132472GmaAffx.56721.1.A1_s_atCD391726--2e-10At2g25610H+-transporting two-sector ATPase, C subunit family proteinC.G.S.X.
0.032e-138GmaAffx.92931.1.S1_atCF808139--8e-2At2g39760BPM3C.G.S.X.
0.022e-138GmaAffx.41569.1.S1_atBQ297175--2e-2At3g5870060S ribosomal protein L11 (RPL11B)C.G.S.X.
0.017e-136PsAffx.C87000057_atPsAffx.C87000057--2e-1At5g11830-C.G.S.X.
0.013e+034PsAffx.C51000013_atPsAffx.C51000013--3e+0At1g68100IAR1 (IAA-ALANINE RESISTANT 1)C.G.S.X.
0.023e+034GmaAffx.93331.1.S1_atCF809056--2e-18At1g60860AGD2 (ARF-GAP DOMAIN 2)C.G.S.X.
0.023e+034GmaAffx.86288.1.S1_atBI425173--3e-5At5g15150ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3)C.G.S.X.
0.023e+034GmaAffx.24268.1.S1_atBU081292--3e+0At3g45525-C.G.S.X.
0.033e+034GmaAffx.20777.2.S1_atBU764579--6e-11At2g22830SQE2 (squalene epoxidase 2)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.491e-63244Arabidopsis thalianaAt4g32530829388vacuolar ATP synthase, putative / V-ATPase, putativeF:ATPase activity;P:ATP synthesis coupled proton transport;C:vacuole;MFOPBA---C.G.S.X.
0.405e-58224Hordeum vulgareContig4069_atContig4069--3e-45At2g25610H+-transporting two-sector ATPase, C subunit family proteinC.G.S.X.
0.342e-39165Oryza sativaOs01g0610100AK059810.1-Vacuolar ATP synthase 21 kDa proteolipid subunit(EC 3.6.3.14) (23-kDa subunit of V-ATPase)4e-23At2g25610H+-transporting two-sector ATPase, C subunit family proteinC.G.S.X.
0.429e-93341Populus trichocarpaPtp.5095.2.S1_a_atCF235242hypothetical protein-2e-83At4g32530vacuolar ATP synthase, putative / V-ATPase, putativeC.G.S.X.
0.367e-56218Triticum aestivumTa.4403.1.S1_atBJ283628--1e-41At2g25610H+-transporting two-sector ATPase, C subunit family proteinC.G.S.X.
0.401e-73276Vitis vinifera1607243_atCD801288hypothetical protein LOC100253217-4e-72At2g25610H+-transporting two-sector ATPase, C subunit family proteinC.G.S.X.
0.361e-58226Zea maysZm.3672.1.S1_atAW453362vacuolar ATP synthase 21 kDa proteolipid subunit-8e-34At2g25610H+-transporting two-sector ATPase, C subunit family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage