CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Gma.17595.1.S1_s_at

Gene name ubiquitin-conjugation enzyme

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.6 Gma.17595.1.S1_s_at BI967850 ubiquitin-conjugation enzyme - 6e-56 At5g41700 UBC8 (UBIQUITIN CONJUGATING ENZYME 8) S.X. H.G.
0.61 81.8 Gma.5831.4.S1_s_at BU926530 translationally controlled tumor-like protein - 3e-19 At3g16640 TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN) S.X. H.G.
0.55 76.3 Gma.8407.1.S1_at AW348317 ADP-ribosylation factor - 9e-120 At2g47170 ARF1A1C S.X. H.G.
0.55 76.3 Gma.3735.1.S1_x_at CD391849 - - 7e-65 At2g02760 ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2) S.X. H.G.
0.46 65.5 Gma.8407.1.S1_x_at AW348317 ADP-ribosylation factor - 9e-120 At2g47170 ARF1A1C S.X. H.G.
0.36 50.8 Gma.10691.3.S1_x_at CA819213 - - 3e-42 At5g53300 UBC10 (ubiquitin-conjugating enzyme 10) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.9 98.0 GSM292373 47_C104.1F.R9F3P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.5 97.7 GSM308560 Mature Soybean (Glycine max) pollen grains Replicate 3 GSE12286 Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
4.4 97.6 GSM171619 15_W.F.M.5, Experimental replicate W GSE7124 Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
4.3 97.5 GSM244814 19_SLO.M5W2.CEL, Experimental replicate 2 GSE9687 Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
4.3 97.5 GSM292169 24_1018.1A.R010P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1 97.3 GSM292233 35_C030.1B.R9B2P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1 97.3 GSM293240 28_1208.1P.R128P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.0 97.2 GSM293247 34_C066.1P.R9P2P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.0 97.2 GSM292168 23_1022.1A.R012P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9 97.1 GSM308556 Mature Soybean (Glycine max) pollen grains replicate 1 GSE12286 Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.38 5e-79 295 Gma.15387.2.S1_at AW101379 - - 2e-52 At5g41700 UBC8 (UBIQUITIN CONJUGATING ENZYME 8) C.G. S.X.
0.40 5e-79 295 Gma.15387.1.S1_s_at CD399274 - - 8e-55 At5g41700 UBC8 (UBIQUITIN CONJUGATING ENZYME 8) C.G. S.X.
0.39 2e-75 284 Gma.10691.3.S1_x_at CA819213 - - 3e-42 At5g53300 UBC10 (ubiquitin-conjugating enzyme 10) C.G. S.X.
0.36 4e-67 256 Gma.11119.3.S1_at CF922781 - - 2e-83 At5g41700 UBC8 (UBIQUITIN CONJUGATING ENZYME 8) C.G. S.X.
0.36 6e-63 242 Gma.13248.1.S1_at BM523367 - - 2e-53 At3g08690 UBC11 (UBIQUITIN-CONJUGATING ENZYME 11) C.G. S.X.
0.31 4e-61 236 Gma.11119.5.S1_at BI315933 - - 2e-99 At5g53300 UBC10 (ubiquitin-conjugating enzyme 10) C.G. S.X.
0.31 4e-61 236 Gma.11119.5.S1_x_at BI315933 - - 2e-99 At5g53300 UBC10 (ubiquitin-conjugating enzyme 10) C.G. S.X.
0.32 2e-59 230 Gma.11119.4.S1_x_at BE555322 - - 1e-94 At5g53300 UBC10 (ubiquitin-conjugating enzyme 10) C.G. S.X.
0.32 2e-59 230 Gma.11119.4.S1_at BE555322 - - 1e-94 At5g53300 UBC10 (ubiquitin-conjugating enzyme 10) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.50 6e-56 218 Arabidopsis thaliana At5g41700 834173 UBC8 (UBIQUITIN CONJUGATING ENZYME 8) One of the polypeptides that constitute the ubiquitin-conjugating enzyme E2 - - - C.G. S.X.
0.39 3e-50 198 Hordeum vulgare Contig1431_at Contig1431 - - 2e-49 At5g53300 UBC10 (ubiquitin-conjugating enzyme 10) C.G. S.X.
0.38 3e-53 210 Oryza sativa Os.11479.1.S1_at - - - 0 C.G. S.X.
0.46 3e-108 393 Populus trichocarpa Ptp.6476.3.S1_s_at CX170246 hypothetical protein - 1e-59 At1g64230 ubiquitin-conjugating enzyme, putative C.G. S.X.
0.40 4e-48 192 Triticum aestivum Ta.2505.1.A1_at BJ261362 - - 2e-33 At5g53300 UBC10 (ubiquitin-conjugating enzyme 10) C.G. S.X.
0.40 5e-66 250 Vitis vinifera 1621094_s_at CF214762 similar to AT4g27960 - 1e-72 At5g41700 UBC8 (UBIQUITIN CONJUGATING ENZYME 8) C.G. S.X.
0.40 3e-68 258 Zea mays Zm.4820.1.A1_a_at BG319643 hypothetical protein LOC100192684 - 1e-35 At5g53300 UBC10 (ubiquitin-conjugating enzyme 10) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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