Gene omics information

Query gene ID	Gma.1689.1.S1_s_at
Gene name	6-phosphogluconate dehydrogenase
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.35	48.6	Gma.1689.1.S1_s_at	AB007907.1	6-phosphogluconate dehydrogenase	-	1e-114	At3g02360	6-phosphogluconate dehydrogenase family protein	S.X.	H.G.	Please select
0.83	92.5	Gma.3107.1.S1_at	BE658900	-	-	1e-97	At5g62790	DXR (1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE)	S.X.	H.G.	Please select
0.73	88.9	Gma.6602.2.S1_s_at	BI320883	-	-	4e-103	At5g16440	IPP1 (ISOPENTENYL DIPHOSPHATE ISOMERASE 1)	S.X.	H.G.	Please select
0.71	87.8	Gma.10455.1.S1_at	BQ628953	-	-	3e-8	At4g34350	HDR (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE)	S.X.	H.G.	Please select
0.57	78.8	GmaAffx.90026.1.S1_s_at	CF805751	-	-	5e-18	At5g60600	HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)	S.X.	H.G.	Please select
0.50	71.7	Gma.11238.1.S1_at	BQ454110	-	-	3e-121	At5g60600	HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.9	98.0	GSM171632	18_W.E.I.3, Experimental replicate W	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
4.8	97.9	GSM171714	7_V.I.I.3, Experimental replicate V	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
4.7	97.8	GSM171711	6_W.B.I.3, Experimental replicate W	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
4.6	97.7	GSM171699	3_W.I.I.3, Experimental replicate W	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
4.6	97.7	GSM293595	26_2077.2B.R246U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.6	97.7	GSM244910	40_SLO.I3L4.CEL, Experimental replicate 4	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
4.5	97.7	GSM171666	26_V.E.I.3, Experimental replicate V	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
4.5	97.7	GSM293553	67_3017.2A.R9A3L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.5	97.7	GSM293226	15_C065.1P.R9P2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.4	97.6	GSM147937	Laser capture microdissected (LCM) suspensor at the globular stage, biological replicate 2	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.65	0	1643	GmaAffx.93074.1.S1_at	CF808799	-	-	1e-35	At3g02360	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please select
0.42	0	983	GmaAffx.92278.1.S1_s_at	CF808003	6-phosphogluconate dehydrogenase	-	4e-74	At3g02360	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please select
0.59	0	837	Gma.3145.1.S1_at	BQ610556	-	-	2e-38	At3g02360	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please select
0.18	1e-68	262	GmaAffx.65732.1.S1_at	BG239631	-	-	3e-29	At3g02360	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please select
0.06	2e-27	125	GmaAffx.78169.2.S1_at	BF597270	-	-	2e-2	At3g14780	-	C.G.	S.X.	Please select
0.05	4e-22	107	Gma.17774.1.S1_at	CA935572	-	-	3e-25	At3g08520	60S ribosomal protein L41 (RPL41D)	C.G.	S.X.	Please select
0.08	2e-2	42	GmaAffx.92223.1.S1_at	CF807948	-	-	5e-25	At5g41670	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please select
0.02	9e-2	40	GmaAffx.74450.1.A1_at	BU547996	-	-	4e+0	At5g51410	LUC7 N_terminus domain-containing protein	C.G.	S.X.	Please select
0.01	3e-1	38	Gma.2061.1.S1_s_at	AW348425	-	-	1e-44	At1g64190	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.61	1e-114	414	Arabidopsis thaliana	At3g02360	821163	6-phosphogluconate dehydrogenase family protein	F:in 6 functions;P:response to salt stress;C:peroxisome;BOMPFAV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	1e-1	38	Hordeum vulgare	HB14A07r_x_at	HB14A07r	-	-	3e+0	At2g37435	cysteine-type endopeptidase inhibitor	C.G.	S.X.	Please select
0.28	3e-36	155	Oryza sativa	Os06g0111500	AF486280.2	-	Cytosolic 6-phosphogluconate dehydrogenase	1e-58	At3g02360	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.60	2e-144	513	Populus trichocarpa	PtpAffx.15840.1.S1_s_at	CV245081	hypothetical protein	-	6e-73	At3g02360	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.23	2e-11	71	Triticum aestivum	Ta.1683.1.S1_x_at	CD871690	-	-	1e-27	At3g02360	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please select
0.58	0	761	Vitis vinifera	1616473_at	CF414627	hypothetical protein LOC100246134	-	5e-135	At3g02360	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please select
0.22	1e-25	117	Zea mays	Zm.406.2.A1_a_at	CK348246	NADPH producing dehydrogenase of the oxidative pentose phosphate pathway	-	1e-12	At3g02360	6-phosphogluconate dehydrogenase family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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