Gene omics information

Query gene ID Gma.16618.1.S1_at
Gene name SOC1
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6382.9Gma.16618.1.S1_atBE330897SOC1-4e-12At2g45660AGL20 (AGAMOUS-LIKE 20)S.X.H.G.
0.4463.3Gma.12197.1.S1_atAW397708--2e-4At2g46370JAR1 (JASMONATE RESISTANT 1)S.X.H.G.
0.3853.3Gma.12197.1.S1_x_atAW397708--2e-4At2g46370JAR1 (JASMONATE RESISTANT 1)S.X.H.G.
0.3040.4Gma.16567.2.S1_atBE331101--2e-9At2g41250haloacid dehalogenase-like hydrolase family proteinS.X.H.G.
0.3040.4GmaAffx.3743.1.A1_atBE824162--3e+0At3g25250AGC2-1 (OXIDATIVE SIGNAL-INDUCIBLE1)S.X.H.G.
0.2735.7GmaAffx.55586.1.S1_atBE347965--6e-6At4g04850KEA3S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
89.3100.0GSM209591mock_0hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
85.0100.0GSM258499Soybean shoot apical meristem, 4 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
76.3100.0GSM258504Soybean shoot apical meristem, 4 short-day replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
47.099.9GSM209590susceptible_48hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
36.399.9GSM209598resistant_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
35.799.9GSM209581susceptible_48hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
30.999.9GSM258500Soybean shoot apical meristem, 6 short-day treatmentGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
30.599.8GSM209573mock_0hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
28.399.8GSM209599susceptible_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
26.999.8GSM209592resistant_6hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.116e-1271GmaAffx.76494.1.S1_atAW309024--7e-20At2g03710SEP4 (SEPALLATA 4)C.G.S.X.
0.054e-1065GmaAffx.7693.1.S1_atBE021327--1e-4At5g65450UBP17 (UBIQUITIN-SPECIFIC PROTEASE 17)C.G.S.X.
0.034e-1065GmaAffx.75942.1.S1_atAW703655--7e-1At4g31790diphthine synthase, putative (DPH5)C.G.S.X.
0.064e-1065GmaAffx.72746.1.S1_atBG509554--3e-25At4g00050UNE10 (unfertilized embryo sac 10)C.G.S.X.
0.064e-1065GmaAffx.71775.1.S1_atAW277471--4e+0At5g12030AT-HSP17.6A (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.6A)C.G.S.X.
0.064e-1065GmaAffx.71789.1.S1_atAW201023--2e-5At4g11970YT521-B-like family proteinC.G.S.X.
0.064e-1065GmaAffx.70413.1.S1_atBE346175--1e-3At5g48030GFA2 (GAMETOPHYTIC FACTOR 2)C.G.S.X.
0.064e-1065GmaAffx.68762.2.S1_atBE331184--1e-6At4g32930unknown proteinC.G.S.X.
0.074e-1065GmaAffx.67137.1.S1_atBE331665--4e+0At5g26890unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.154e-1271Arabidopsis thalianaAt2g45660819174AGL20 (AGAMOUS-LIKE 20)Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.---C.G.S.X.
0.065e-134Hordeum vulgareContig10383_atContig10383--6e-4At2g22540SVP (SHORT VEGETATIVE PHASE)C.G.S.X.
0.153e-240Oryza sativaOs.49760.1.S1_at---0C.G.S.X.
0.236e-49194Populus trichocarpaPtpAffx.56981.3.S1_atCV242364MIKC mads-box transcription factor SOC1-4e-23At4g11880AGL14 (agamous-like 14)C.G.S.X.
0.102e-240Triticum aestivumTa.25343.1.A1_atCD374116MADS-box transcription factor TaAGL7-1e-7At2g45660AGL20 (AGAMOUS-LIKE 20)C.G.S.X.
0.122e-548Vitis vinifera1609046_atCB971729hypothetical protein LOC100256085-1e-13At2g45650AGL6 (AGAMOUS-LIKE 6)C.G.S.X.
0.127e-650Zea maysZm.15830.1.A1_atAI491392--3e-5At4g22950AGL19 (AGAMOUS-LIKE 19)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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