Gene omics information

Query gene ID Gma.15578.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9499.2Gma.15578.1.S1_atCD414652--2e-15At5g53550YSL3 (YELLOW STRIPE LIKE 3)S.X.H.G.
0.3447.2Gma.6914.1.A1_atBG155750--4e+0At5g64590unknown proteinS.X.H.G.
0.3346.1Gma.7199.1.S1_atAI443555--7e-56At4g29490aminopeptidase/ manganese ion bindingS.X.H.G.
0.3040.4Gma.15598.1.S1_atCD407911--4e+0At5g65400unknown proteinS.X.H.G.
0.2633.9Gma.6744.1.S1_atBE657556--2e-53At4g38040exostosin family proteinS.X.H.G.
0.2430.9Gma.932.1.S1_atBE823341--3e-7At3g01910SOX (SULFITE OXIDASE)S.X.H.G.
0.2430.9Gma.4754.1.S1_atCD394174--1e-20At5g19150carbohydrate kinase familyS.X.H.G.
0.2126.6GmaAffx.41769.1.S1_atBE657452--1e-17At1g19140-S.X.H.G.
0.1721.2GmaAffx.89071.1.S1_s_atCK605653--2e-36At1g26550peptidyl-prolyl cis-trans isomerase PPIC-type family proteinS.X.H.G.
0.1518.7GmaAffx.51675.1.A1_atBU546652--8e-5At2g39805integral membrane Yip1 family proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
18.499.7GSM309344transgenic RNAiOleosin, biol rep 1, tech rep 2GSE12300Suppression of oleosin in soybean cotyledon
18.099.7GSM209597susceptible_24hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
16.899.7GSM309557storage protein suppression expt, RNAi biol rep1, tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean Cotyledons
16.399.6GSM309531storage protein suppression expt, RNAi biol rep2, tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean Cotyledons
16.199.6GSM309343transgenic RNAiOleosin, biol rep 1, tech rep 1GSE12300Suppression of oleosin in soybean cotyledon
15.999.6GSM209596resistant_24hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
15.899.6GSM309529storage protein suppression expt, RNAi biol rep1, tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean Cotyledons
15.399.6GSM309530storage protein suppression expt, RNAi biol rep2, tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean Cotyledons
12.999.5GSM309346transgenic RNAiOleosin, biol rep 2, tech rep 2GSE12300Suppression of oleosin in soybean cotyledon
11.599.4GSM245933Leaf_Water Control_Rep 1_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.083e-963Gma.9704.1.S1_atCD397969--1e-8At5g24380YSL2 (YELLOW STRIPE LIKE 2)C.G.S.X.
0.102e-757Gma.3403.1.S1_atBQ628012--4e-4At5g53550YSL3 (YELLOW STRIPE LIKE 3)C.G.S.X.
0.036e-446Gma.4128.1.S1_atBI968698--1e-42At3g27020YSL6 (YELLOW STRIPE LIKE 6)C.G.S.X.
0.036e-136HgAffx.17760.1.S1_atCB824398--8e-2At2g44400DC1 domain-containing proteinC.G.S.X.
0.026e-136GmaAffx.92663.1.S1_atCF808388ethylene responsive protein-8e-2At3g12510unknown proteinC.G.S.X.
0.026e-136GmaAffx.23955.1.A1_atBU551166--1e+0At3g07910-C.G.S.X.
0.036e-136Gma.9551.1.S1_atAY157739.1nucleoside diphosphate kinase-6e-34At4g09320NDPK1C.G.S.X.
0.036e-136Gma.1358.1.S1_atBQ295834--8e-1At1g07880ATMPK13C.G.S.X.
0.012e+034PsAffx.C204000029_atPsAffx.C204000029--4e+0At5g64905PROPEP3 (Elicitor peptide 3 precursor)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.252e-1583Arabidopsis thalianaAt5g53550835437YSL3 (YELLOW STRIPE LIKE 3)F:oligopeptide transporter activity;P:oligopeptide transport, response to nematode;C:unknown;BPFOAV---C.G.S.X.
0.146e-857Hordeum vulgareContig19081_atContig19081--2e-3At5g53550YSL3 (YELLOW STRIPE LIKE 3)C.G.S.X.
0.122e-757Oryza sativaOs02g06499009630.m04172-Iron-phytosiderophore transporter protein yellowstripe 12e-5At5g24380YSL2 (YELLOW STRIPE LIKE 2)C.G.S.X.
0.422e-44180Populus trichocarpaPtpAffx.16423.1.S1_atCV262996oligopeptide transporter OPT family-3e-10At5g53550YSL3 (YELLOW STRIPE LIKE 3)C.G.S.X.
0.084e-136Triticum aestivumTaAffx.55509.1.S1_atCA665154--7e-5At4g24120YSL1 (YELLOW STRIPE LIKE 1)C.G.S.X.
0.511e-124444Vitis vinifera1617609_atCF207468hypothetical protein LOC100255514-3e-24At5g24380YSL2 (YELLOW STRIPE LIKE 2)C.G.S.X.
0.027e-134Zea maysZm.2315.1.A1_atBG841450nodulin-like protein-4e-4At3g18200nodulin MtN21 family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage