Gene omics information

Query gene ID Gma.15492.1.S1_s_at
Gene name chalcone isomerase
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7790.3Gma.15492.1.S1_s_atAF276302.1chalcone isomerase-2e+0At1g52510hydrolase, alpha/beta fold family proteinS.X.H.G.
0.9298.9GmaAffx.37677.1.S1_s_atBE022626HIDH mRNA for 2-hydroxyisoflavanone dehydratase-3e-1At2g30050transducin family protein / WD-40 repeat family proteinS.X.H.G.
0.8693.0Gma.4300.1.S1_s_atS46989.1chalcone synthase-5e-29At5g13930TT4 (TRANSPARENT TESTA 4)S.X.H.G.
0.8693.0Gma.4300.3.S1_s_atAI443042chalcone synthase-1e-5At5g13930TT4 (TRANSPARENT TESTA 4)S.X.H.G.
0.8392.5Gma.2308.1.S1_s_atAF022462.1isoflavone synthase 2-6e-2At1g67195MIR414 (MICRORNA 414)S.X.H.G.
0.8392.5Gma.4300.3.S1_x_atAI443042chalcone synthase-1e-5At5g13930TT4 (TRANSPARENT TESTA 4)S.X.H.G.
0.8091.5GmaAffx.92722.1.S1_atCF8075612-hydroxyisoflavanone dehydratase-6e-1At2g30050transducin family protein / WD-40 repeat family proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.099.3GSM1716993_W.I.I.3, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
8.699.1GSM17163218_W.E.I.3, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
7.899.0GSM17165924_W.F.I.3, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
7.498.9GSM17161013_V.A.I.3, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
7.398.9GSM1717147_V.I.I.3, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
6.998.8GSM17169131_W.L.I.3, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
6.998.8GSM2449164_SLO.I3U1.CEL, Experimental replicate 1GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
6.998.8GSM17168630_V.F.I.3, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
6.898.7GSM17166626_V.E.I.3, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
6.198.5GSM29307777_1077.1N.R046L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.7101570GmaAffx.93245.1.S1_s_atCF808970indole-3-acetic acid induced protein ARG-2 homolog-4e-2At1g02820late embryogenesis abundant 3 family protein / LEA3 family proteinC.G.S.X.
0.049e-25115Gma.12342.3.S1_atBQ081225--1e-5At5g25460unknown proteinC.G.S.X.
0.072e-1997GmaAffx.67137.1.S1_atBE331665--4e+0At5g26890unknown proteinC.G.S.X.
0.128e-1375Gma.2826.1.S1_x_atCD397710chalcone isomerase 1B1-2e+0At5g24400emb2024 (embryo defective 2024)C.G.S.X.
0.128e-1375Gma.2826.1.S1_s_atCD397710chalcone isomerase 1B2 /// chalcone isomerase 1B1-2e+0At5g24400emb2024 (embryo defective 2024)C.G.S.X.
0.178e-1375Gma.2826.1.S1_atCD397710chalcone isomerase 1B2 /// chalcone isomerase 1B1-2e+0At5g24400emb2024 (embryo defective 2024)C.G.S.X.
0.031e-1171GmaAffx.75942.1.S1_atAW703655--7e-1At4g31790diphthine synthase, putative (DPH5)C.G.S.X.
0.051e-1171GmaAffx.26289.1.S1_atBE331434--4e-3At5g06570hydrolaseC.G.S.X.
0.041e-1171Gma.4643.1.S1_atBU547906NAC domain protein-1e-3At1g56010NAC1C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e+034Arabidopsis thalianaAt1g52510841682hydrolase, alpha/beta fold family proteinF:hydrolase activity, catalytic activity;P:unknown;C:chloroplast, chloroplast envelope;BOPMFA---C.G.S.X.
0.031e-344Hordeum vulgareContig19809_atContig19809--1e+0At3g24508-C.G.S.X.
0.039e-136Oryza sativaOsAffx.23784.1.S1_at---0C.G.S.X.
0.092e-757Populus trichocarpaPtpAffx.4850.1.A1_s_atCV256396chalcone isomerase-2e-3At3g55120TT5 (TRANSPARENT TESTA 5)C.G.S.X.
0.042e-344Triticum aestivumTaAffx.30022.1.S1_atCA630291--2e+0At3g54290-C.G.S.X.
0.074e-857Vitis vinifera1615912_atCA813921chalcone isomerase-2e+0At5g05270chalcone-flavanone isomerase family proteinC.G.S.X.
0.039e-444Zea maysZmAffx.485.1.S1_atAI691349--8e-1Atmg00140-C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage