CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Gma.15367.1.S1_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.6 Gma.15367.1.S1_at CD412241 - - 7e-60 At3g59910 - S.X. H.G.
0.83 92.5 Gma.1913.1.S1_at BI970928 - - 0 At2g37620 ACT1 (ACTIN 1) S.X. H.G.
0.80 91.5 Gma.1324.1.S1_at BE658235 - - 1e-131 At4g35950 ARAC6 (ARABIDOPSIS RAC-LIKE 6) S.X. H.G.
0.80 91.5 Gma.7774.1.S1_at CD401719 - - 1e-26 At3g10540 3-phosphoinositide-dependent protein kinase, putative S.X. H.G.
0.77 90.3 Gma.2135.1.S1_a_at BE660424 - - 7e-1 At3g26400 EIF4B1 S.X. H.G.
0.32 43.7 Gma.4940.1.S1_at BI969941 - - 7e-7 At3g66654 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
176.7 100.0 GSM308559 Mature Soybean (Glycine max) pollen grains Replicate 2 GSE12286 Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
157.4 100.0 GSM308556 Mature Soybean (Glycine max) pollen grains replicate 1 GSE12286 Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
139.3 100.0 GSM308560 Mature Soybean (Glycine max) pollen grains Replicate 3 GSE12286 Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
6.7 98.7 GSM147933 Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 1 GSE6414 Expression data from soybean seed compartments with embryos at the globular stage
6.4 98.6 GSM147934 Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 2 GSE6414 Expression data from soybean seed compartments with embryos at the globular stage
6.0 98.5 GSM182030 Laser capture microdissected (LCM) embryo proper at the heart stage, biological replicate 2 GSE7511 Expression data from soybean seed compartments with embryos at the heart stage
5.9 98.5 GSM182047 Whole Seed at the heart stage, biological replicate 1 GSE7511 Expression data from soybean seed compartments with embryos at the heart stage
5.5 98.3 GSM191075 Soybean_Cotyledon_EP1 GSE7881 Expression data from soybean seed compartments with embryos at the cotyledon stage
5.4 98.2 GSM182042 Laser capture microdissected (LCM) hilum at the heart stage, biological replicate 2 GSE7511 Expression data from soybean seed compartments with embryos at the heart stage
5.1 98.1 GSM182048 Whole Seed at the heart stage, biological replicate 2 GSE7511 Expression data from soybean seed compartments with embryos at the heart stage
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 8e-2 40 PsAffx.C17000014_at PsAffx.C17000014 - - 1e-2 At2g16860 GCIP-interacting family protein C.G. S.X.
0.01 1e+0 36 PsAffx.psMA012xN04f_at PsAffx.psMA012xN04f - - 2e+1 At5g52370 unknown protein C.G. S.X.
0.01 1e+0 36 PsAffx.C3000020_at PsAffx.C3000020 - - 1e+0 At5g05550 transcription factor C.G. S.X.
0.01 1e+0 36 PsAffx.C30000011_at PsAffx.C30000011 - - 1e+1 At5g26890 unknown protein C.G. S.X.
0.00 1e+0 36 PsAffx.C130000049_at PsAffx.C130000049 - - 1e+0 At4g00590 asparaginase 2 family protein C.G. S.X.
0.02 1e+0 36 GmaAffx.88260.1.S1_at BU964709 - - 1e-9 At2g17190 ubiquitin family protein C.G. S.X.
0.02 1e+0 36 GmaAffx.50716.1.S1_at BM308961 - - 2e-30 At3g17205 UPL6 (UBIQUITIN PROTEIN LIGASE 6) C.G. S.X.
0.01 5e+0 34 PsAffx.C75000029_at PsAffx.C75000029 - - 3e-1 At1g04778 unknown protein C.G. S.X.
0.00 5e+0 34 PsAffx.C106000038_at PsAffx.C106000038 - - 3e-1 At4g15230 PDR2 (PLEIOTROPIC DRUG RESISTANCE 2) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.35 7e-60 232 Arabidopsis thaliana At3g59910 825161 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO - - - C.G. S.X.
0.10 1e-13 77 Hordeum vulgare Contig8720_at Contig8720 - - 3e-16 At2g44090 - C.G. S.X.
0.07 3e-11 71 Oryza sativa Os11g0246900 AK061179.1 - Ankyrin repeat containing protein 2e-14 At2g44090 - C.G. S.X.
0.23 4e-25 117 Populus trichocarpa Ptp.7538.1.S1_at DN492313 hypothetical protein - 8e-13 At2g44090 - C.G. S.X.
0.06 2e-5 52 Triticum aestivum Ta.6307.1.S1_a_at CA661142 - - 5e-11 At2g44090 - C.G. S.X.
0.33 1e-71 270 Vitis vinifera 1607124_at CF211512 hypothetical protein LOC100242432 - 1e-31 At3g59910 - C.G. S.X.
0.09 2e-9 63 Zea mays Zm.10554.1.A1_at CA398680 - - 3e-10 At2g44090 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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