CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Gma.15133.2.S1_a_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.86 93.0 Gma.15133.2.S1_a_at BE803230 - - 5e-1 At4g13860 glycine-rich RNA-binding protein, putative S.X. H.G.
0.43 60.6 Gma.15133.2.S1_at BE803230 - - 5e-1 At4g13860 glycine-rich RNA-binding protein, putative S.X. H.G.
0.24 30.9 Gma.2422.2.S1_at CF922564 - - 1e-44 At5g05010 clathrin adaptor complexes medium subunit-related S.X. H.G.
0.17 21.2 GmaAffx.83007.1.S1_at BQ252622 - - 7e-17 At3g02540 RAD23-3 (PUTATIVE DNA REPAIR PROTEIN RAD23-3) S.X. H.G.
0.14 17.5 Gma.6829.2.S1_at BG043600 - - 1e+0 At2g26660 SPX2 (SPX DOMAIN GENE 2) S.X. H.G.
0.11 14.2 Gma.8087.2.S1_a_at BM520889 - - 1e+0 At1g26690 emp24/gp25L/p24 family protein S.X. H.G.
0.08 11.0 GmaAffx.82078.1.S1_at BI424683 - - 1e-27 At3g26420 ATRZ-1A S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.4 98.2 GSM294132 86_3112.2G.R9G1P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.6 97.7 GSM293548 62_3010.2A.R9A2P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.6 97.7 GSM294514 77_2502.2K.R025P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.5 97.7 GSM294218 69_3140.2H.R9H3P_new, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.4 97.6 GSM293060 61_C034.1N.R9N3P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.2 97.4 GSM292959 38_C232.1M.R9M3P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.2 97.4 GSM293049 51_C020.1N.R9N1P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.2 97.4 GSM293328 18_C090.1Q.R9Q3P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.0 97.2 GSM294186 48_2362.2H.R001P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8 97.0 GSM258496 Vegetative soybean shoot apical meristem GSE10251 Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
1.00 0 1889 Gma.15133.2.S1_at BE803230 - - 5e-1 At4g13860 glycine-rich RNA-binding protein, putative C.G. S.X.
0.28 1e-113 410 Gma.13594.1.S1_at CD401313 - - 1e+0 At3g03350 binding / catalytic/ oxidoreductase C.G. S.X.
0.34 2e-103 377 Gma.15133.1.A1_at CD404105 - - 4e-1 At4g13860 glycine-rich RNA-binding protein, putative C.G. S.X.
0.02 5e-5 50 Gma.5702.1.S1_a_at CD413767 - - 1e-11 At4g24770 RBP31 (31-KDA RNA BINDING PROTEIN) C.G. S.X.
0.03 1e-2 42 PsAffx.C28000050_at PsAffx.C28000050 - - 1e+0 At2g35010 ATO1 (Arabidopsis thioredoxin O1) C.G. S.X.
0.02 1e-2 42 Gma.10631.1.S1_at CA783445 - - 1e-29 At4g24770 RBP31 (31-KDA RNA BINDING PROTEIN) C.G. S.X.
0.02 4e-2 40 PsAffx.C129000031_at PsAffx.C129000031 - - 2e-2 At1g11700 unknown protein C.G. S.X.
0.03 4e-2 40 Gma.7906.2.S1_at BM309579 - - 2e-12 At1g63610 unknown protein C.G. S.X.
0.01 2e-1 38 PsAffx.C3000188_at PsAffx.C3000188 - - 8e-2 At4g39570 kelch repeat-containing F-box family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 5e-1 36 Arabidopsis thaliana At4g13860 827020 glycine-rich RNA-binding protein, putative F:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPFOBA - - - C.G. S.X.
0.03 4e+0 32 Hordeum vulgare Contig25984_at Contig25984 - - 9e-1 At4g24380 unknown protein C.G. S.X.
0.03 1e+0 36 Oryza sativa Os05g0240600 9633.m01332 - - 4e-2 At3g25573 unknown protein C.G. S.X.
0.30 2e-56 220 Populus trichocarpa PtpAffx.134230.1.A1_at CV243145 hypothetical protein - 6e-1 At5g67060 HEC1 (HECATE 1) C.G. S.X.
0.02 2e+0 34 Triticum aestivum Ta.29245.1.S1_at CD877061 - - 2e+0 At5g18810 SCL28 C.G. S.X.
0.03 6e-1 34 Vitis vinifera 1607903_at CF608166 hypothetical protein LOC100267377 - 1e+0 At1g67670 unknown protein C.G. S.X.
0.03 8e-1 34 Zea mays ZmAffx.445.1.A1_at AI677025 hypothetical protein LOC100193064 - 3e+0 At5g38890 exoribonuclease-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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