Gene omics information

Query gene ID	Gma.1479.2.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.6	Gma.1479.2.S1_at	AW279120	-	-	6e-21	At4g19120	ERD3 (early-responsive to dehydration 3)	S.X.	H.G.	Please select
0.50	71.7	GmaAffx.65773.1.S1_at	BI320311	-	-	2e-44	At4g19120	ERD3 (early-responsive to dehydration 3)	S.X.	H.G.	Please select
0.15	18.7	GmaAffx.27367.1.S1_at	BG653618	-	-	7e-9	At1g79690	atnudt3 (Arabidopsis thaliana Nudix hydrolase homolog 3)	S.X.	H.G.	Please select
0.12	15.1	GmaAffx.85171.1.S1_at	BU091668	-	-	7e-6	At5g10710	protein binding	S.X.	H.G.	Please select
0.10	13.0	GmaAffx.56409.1.S1_at	BU965321	-	-	1e-16	At1g08750	GPI-anchor transamidase, putative	S.X.	H.G.	Please select
0.07	10.2	GmaAffx.93620.1.S1_s_at	CF809345	-	-	3e-19	At3g61140	FUS6 (FUSCA 6)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.5	97.7	GSM293249	36_C055.1P.V7P1L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM294605	72_3201.2L.V7L1L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM244895	37_CON.M3W1.CEL, Experimental replicate 1	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
3.8	97.0	GSM293395	79_1567.1Q.R156L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM294028	79_3099.2F.V7F2L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM244872	31_SLO.I5U1.CEL, Experimental replicate 1	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
3.5	96.6	GSM293192	74_C041.1O.V7O1L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM294165	29_3143.2H.V7H3L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM293665	8_3019.2B.V7B1L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM293237	25_1543.1P.R053L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.38	1e-112	406	Gma.1939.1.S1_at	AW100789	-	-	8e-19	At4g19120	ERD3 (early-responsive to dehydration 3)	C.G.	S.X.	Please select
0.22	2e-83	309	GmaAffx.65773.1.S1_at	BI320311	-	-	2e-44	At4g19120	ERD3 (early-responsive to dehydration 3)	C.G.	S.X.	Please select
0.08	5e-16	85	Gma.1479.1.A1_at	CD416783	-	-	4e+0	At3g24250	glycine-rich protein	C.G.	S.X.	Please select
0.04	5e-7	56	Gma.6062.2.S1_a_at	CD395597	-	-	2e-16	At3g23300	dehydration-responsive protein-related	C.G.	S.X.	Please select
0.04	5e-7	56	Gma.6062.2.S1_at	CD395597	-	-	2e-16	At3g23300	dehydration-responsive protein-related	C.G.	S.X.	Please select
0.04	2e-6	54	Gma.4277.2.S1_a_at	CA785837	-	-	2e-51	At1g26850	dehydration-responsive family protein	C.G.	S.X.	Please select
0.09	2e-6	54	Gma.4277.3.S1_at	AI960832	-	-	9e-8	At1g26850	dehydration-responsive family protein	C.G.	S.X.	Please select
0.14	3e-5	50	Gma.14536.1.S1_at	BU548115	-	-	1e-26	At4g00740	dehydration-responsive protein-related	C.G.	S.X.	Please select
0.12	1e-4	48	Gma.9233.1.S1_at	AW734649	-	-	8e-21	At4g00740	dehydration-responsive protein-related	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.17	6e-21	101	Arabidopsis thaliana	At4g19120	827650	ERD3 (early-responsive to dehydration 3)	F:unknown;P:response to water deprivation;C:cellular_component unknown;PBOAF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.09	2e-4	46	Hordeum vulgare	Contig13970_at	Contig13970	-	-	6e-13	At4g00740	dehydration-responsive protein-related	C.G.	S.X.	Please select
0.08	1e-2	42	Oryza sativa	Os04g0569400	9632.m04662	-	Putative methyltransferase DUF248 family protein	2e-11	At4g00740	dehydration-responsive protein-related	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.28	2e-64	246	Populus trichocarpa	PtpAffx.22629.2.S1_at	CV230488	hypothetical protein	-	2e-41	At4g19120	ERD3 (early-responsive to dehydration 3)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.07	5e-3	42	Triticum aestivum	Ta.5250.3.S1_a_at	CA602002	-	-	3e-7	At4g14360	dehydration-responsive protein-related	C.G.	S.X.	Please select
0.27	2e-33	141	Vitis vinifera	1611979_at	CB979128	hypothetical protein LOC100251016	-	1e-31	At4g19120	ERD3 (early-responsive to dehydration 3)	C.G.	S.X.	Please select
0.11	8e-3	40	Zea mays	Zm.3522.1.S1_at	BG265505	-	-	1e-19	At4g00740	dehydration-responsive protein-related	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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