Gene omics information

Query gene ID	Gma.14354.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.57	78.8	Gma.14354.1.S1_at	AW755388	-	-	3e-67	At3g53610	ATRAB8	S.X.	H.G.	Please select
0.77	90.3	Gma.2954.1.S1_at	CD404770	-	-	4e-34	At5g55160	SUMO2 (SMALL UBIQUITIN-LIKE MODIFIER 2)	S.X.	H.G.	Please select
0.77	90.3	Gma.6353.1.S1_at	AI960028	-	-	1e-4	At1g67250	proteasome maturation factor UMP1 family protein	S.X.	H.G.	Please select
0.63	82.9	Gma.15883.1.S1_x_at	AF255338.1	20S proteasome subunit	-	2e-86	At1g53850	PAE1	S.X.	H.G.	Please select
0.62	82.1	Gma.11256.1.S1_at	CD401123	-	-	7e-28	At1g56450	PBG1	S.X.	H.G.	Please select
0.57	78.8	Gma.10826.5.S1_x_at	BM732455	-	-	2e-108	At5g55190	RAN3 (RAN GTPASE 3)	S.X.	H.G.	Please select
0.57	78.8	Gma.6150.2.S1_s_at	CD416056	-	-	1e-23	At5g59880	ADF3 (ACTIN DEPOLYMERIZING FACTOR 3)	S.X.	H.G.	Please select
0.57	78.8	Gma.5581.1.S1_at	CD392224	-	-	8e-53	At3g27430	PBB1	S.X.	H.G.	Please select
0.48	67.7	Gma.5964.1.S1_at	AW348696	-	-	3e-62	At3g13235	ubiquitin family protein	S.X.	H.G.	Please select
0.48	67.7	Gma.3626.2.S1_x_at	BQ612673	-	-	2e-60	At3g59920	ATGDI2 (RAB GDP DISSOCIATION INHIBITOR 2)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
9.7	99.3	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM293584	16_2089.2B.R181U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM293601	31_2069.2B.R213L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM293589	20_2073.2B.R308L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.9	95.4	GSM293333	22_1549.1Q.R078L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.6	94.5	GSM293586	18_2092.2B.R298P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.6	94.5	GSM293615	44_2051.2B.R038L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.6	94.5	GSM293217	97_1131.1O.R083U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.5	94.2	GSM293203	84_1143.1O.R091L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.5	94.2	GSM293211	91_1151.1O.R095L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.94	0	1828	Gma.14354.1.S1_x_at	AW755388	-	-	3e-67	At3g53610	ATRAB8	C.G.	S.X.	Please select
0.63	0	956	GmaAffx.91170.1.S1_x_at	CF806895	-	-	5e-58	At3g46060	ATRAB8A	C.G.	S.X.	Please select
0.63	0	956	GmaAffx.91170.1.S1_s_at	CF806895	-	-	5e-58	At3g46060	ATRAB8A	C.G.	S.X.	Please select
0.58	0	831	Gma.11282.1.S1_at	AI443415	-	-	2e-62	At3g53610	ATRAB8	C.G.	S.X.	Please select
0.57	0	698	GmaAffx.93385.1.S1_x_at	CF806095	-	-	1e-68	At3g46060	ATRAB8A	C.G.	S.X.	Please select
0.57	0	698	GmaAffx.93385.1.S1_at	CF806095	-	-	1e-68	At3g46060	ATRAB8A	C.G.	S.X.	Please select
0.48	0	670	Gma.14354.2.S1_at	BI472159	-	-	3e-53	At5g59840	Ras-related GTP-binding family protein	C.G.	S.X.	Please select
0.38	3e-102	373	Gma.5641.1.S1_at	AW349077	-	-	1e-82	At5g59840	Ras-related GTP-binding family protein	C.G.	S.X.	Please select
0.13	2e-47	190	GmaAffx.72129.1.S1_at	BE806728	-	-	1e-14	At3g53610	ATRAB8	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.54	3e-67	256	Arabidopsis thaliana	At3g53610	824529	ATRAB8	GTPase AtRAB8 (atrab8)	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.38	1e-37	157	Hordeum vulgare	Contig3335_at	Contig3335	-	-	3e-67	At5g59840	Ras-related GTP-binding family protein	C.G.	S.X.	Please select
0.43	1e-43	178	Oryza sativa	Os.12233.2.S1_x_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.55	2e-131	470	Populus trichocarpa	Ptp.2072.2.S1_s_at	CA931719	hypothetical protein	-	6e-83	At3g46060	ATRAB8A	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.36	1e-66	254	Triticum aestivum	Ta.6968.1.S1_at	CK196001	-	-	1e-45	At3g53610	ATRAB8	C.G.	S.X.	Please select
0.51	2e-146	517	Vitis vinifera	1619471_at	BQ794353	hypothetical protein LOC100243217	-	1e-112	At3g46060	ATRAB8A	C.G.	S.X.	Please select
0.35	5e-67	254	Zea mays	Zm.6039.1.A1_at	BG837895	-	-	9e-65	At5g03520	ATRAB8C	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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