Gene omics information

Query gene ID	Gma.14057.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.50	71.7	Gma.14057.1.S1_at	BM307276	-	-	9e-6	At3g24200	FAD binding / monooxygenase/ oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen	S.X.	H.G.	Please select
0.35	48.6	GmaAffx.44856.1.A1_at	BE824220	-	-	7e-1	At2g41170	F-box family protein	S.X.	H.G.	Please select
0.19	23.7	Gma.15466.1.S1_at	CD415987	-	-	8e-6	At4g32551	LUG (LEUNIG)	S.X.	H.G.	Please select
0.13	16.3	Gma.15731.1.S1_at	CD402433	-	-	1e+0	At5g29807	unknown protein	S.X.	H.G.	Please select
0.08	11.0	Gma.1814.1.S1_at	L14929.1	-	-	4e-57	At3g11730	ATFP8	S.X.	H.G.	Please select
0.07	10.2	Gma.3565.1.S1_at	AI938310	-	-	3e-1	At3g53940	mitochondrial substrate carrier family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
36.7	99.9	GSM201104	Laser capture microdissected (LCM) axis shoot meristem at the early maturation stage, biological replicate 1	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
33.7	99.9	GSM191090	Soybean_Cotyledon_OI2	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage
18.3	99.7	GSM201105	Laser capture microdissected (LCM) axis shoot meristem at the early maturation stage, biological replicate 2	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
17.1	99.7	GSM147935	Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 3	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
17.1	99.7	GSM201115	Laser capture microdissected (LCM) cotyledon adaxial parenchyma at the early maturation stage, biological replicate 2	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
13.8	99.5	GSM201096	Laser capture microdissected (LCM) axis epidermis at the early maturation stage, biological replicate 1	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
13.2	99.5	GSM191089	Soybean_Cotyledon_OI1	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage
12.2	99.5	GSM201120	Laser capture microdissected (LCM) seed coat hourglass at the early maturation stage, biological replicate 1	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
12.0	99.4	GSM182046	Laser capture microdissected (LCM) outer integument at the heart stage, biological replicate 2	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage
10.3	99.3	GSM201108	Laser capture microdissected (LCM) cotyledon abaxial epidermis at the early maturation stage, biological replicate 1	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e-1	38	Gma.7179.1.S1_at	AW348714	-	-	4e+0	At3g53530	heavy-metal-associated domain-containing protein	C.G.	S.X.	Please select
0.02	8e-1	36	Gma.7179.2.S1_at	BE800769	-	-	2e+0	At3g54230	nucleic acid binding / nucleotide binding / zinc ion binding	C.G.	S.X.	Please select
0.01	3e+0	34	PsAffx.C64000046_at	PsAffx.C64000046	-	-	3e-1	At1g09500	cinnamyl-alcohol dehydrogenase family / CAD family	C.G.	S.X.	Please select
0.01	3e+0	34	PsAffx.C47000057_at	PsAffx.C47000057	-	-	1e+0	At1g21200	transcription factor	C.G.	S.X.	Please select
0.01	3e+0	34	PsAffx.C260000003_at	PsAffx.C260000003	-	-	1e+0	At2g35635	UBQ7	C.G.	S.X.	Please select
0.01	3e+0	34	PsAffx.C23000064_at	PsAffx.C23000064	-	-	3e+0	At2g37180	RD28 (RESPONSIVE TO DESICCATION 28)	C.G.	S.X.	Please select
0.01	3e+0	34	PsAffx.C200000009_at	PsAffx.C200000009	-	-	2e+0	At5g17510	unknown protein	C.G.	S.X.	Please select
0.02	3e+0	34	HgAffx.6748.1.S1_at	CB825463	-	-	5e+0	At1g10140	-	C.G.	S.X.	Please select
0.03	3e+0	34	HgAffx.3946.1.A1_at	CK348744	-	-	3e-2	At5g19800	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.08	9e-6	52	Arabidopsis thaliana	At3g24200	822006	FAD binding / monooxygenase/ oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen	F:oxidoreductase activity, monooxygenase activity, FAD binding, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen;P:ubiquinone biosynthetic process, metabolic process;C:unknown;BOFMPA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	1e+0	34	Hordeum vulgare	rbaal8a22_at	rbaal8a22	-	-	2e+0	At1g75690	chaperone protein dnaJ-related	C.G.	S.X.	Please select
0.02	4e+0	34	Oryza sativa	Os10g0213550	9638.m01320	-	-	3e-1	At2g31420	DNA binding	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.34	3e-34	147	Populus trichocarpa	Ptp.5217.1.S1_at	CV245754	hypothetical protein	-	2e-12	At3g24200	FAD binding / monooxygenase/ oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	6e-1	36	Triticum aestivum	Ta.11078.1.A1_at	BQ168504	-	-	1e+1	At5g38160	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	C.G.	S.X.	Please select
0.02	3e+0	32	Vitis vinifera	1614458_at	CB971484	-	-	1e+0	At5g48595	-	C.G.	S.X.	Please select
0.02	1e+1	30	Zea mays	ZmAffx.146.1.A1_at	AI667826	30S ribosomal protein S31	-	2e-1	At4g21450	vesicle-associated membrane family protein / VAMP family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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