Gene omics information

Query gene ID Gma.13975.1.A1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4360.6Gma.13975.1.A1_atCD412131--3e+0At2g45640SAP18 (SIN3 ASSOCIATED POLYPEPTIDE P18)S.X.H.G.
0.4360.6GmaAffx.31414.1.A1_atBI786718--3e-1At5g03990unknown proteinS.X.H.G.
0.2430.9GmaAffx.15790.1.A1_atCD405768--2e+0At1g70790C2 domain-containing proteinS.X.H.G.
0.1619.7GmaAffx.14602.1.S1_atBM731566--2e-1At3g45851unknown proteinS.X.H.G.
0.1417.5GmaAffx.14280.1.S1_atBM095066--1e-8At1g22710SUC2 (SUCROSE-PROTON SYMPORTER 2)S.X.H.G.
0.047.0Gma.17745.2.S1_atBE801812--4e-3At5g13100unknown proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
18.799.7GSM201096Laser capture microdissected (LCM) axis epidermis at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
14.999.6GSM201122Laser capture microdissected (LCM) seed coat hilum at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
14.099.6GSM201124Laser capture microdissected (LCM) seed coat palisade at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
9.899.3GSM201104Laser capture microdissected (LCM) axis shoot meristem at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
9.499.2GSM147945Laser capture microdissected (LCM) epidermis at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stage
8.699.1GSM201102Laser capture microdissected (LCM) axis root meristem at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
8.499.1GSM201105Laser capture microdissected (LCM) axis shoot meristem at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
8.299.0GSM201108Laser capture microdissected (LCM) cotyledon abaxial epidermis at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
8.099.0GSM201098Laser capture microdissected (LCM) axis plumule at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
7.799.0GSM147935Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stage
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.011e+034PsAffx.C35000012_atPsAffx.C35000012--9e-1At1g64660ATMGL (ARABIDOPSIS THALIANA METHIONINE GAMMA-LYASE)C.G.S.X.
0.031e+034HgAffx.3474.1.S1_atCK349216--2e+0At3g55070-C.G.S.X.
0.041e+034GmaAffx.73183.1.S1_atBI700424--8e-1At1g77120ADH1 (ALCOHOL DEHYDROGENASE 1)C.G.S.X.
0.011e+034Gma.5676.1.S1_atAF126550.1mannosyl-oligosaccharide 1,2-alpha-mannosidase-1e-86At3g21160mannosyl-oligosaccharide 1,2-alpha-mannosidase, putativeC.G.S.X.
0.011e+034Gma.5676.1.S1_s_atAF126550.1mannosyl-oligosaccharide 1,2-alpha-mannosidase-1e-86At3g21160mannosyl-oligosaccharide 1,2-alpha-mannosidase, putativeC.G.S.X.
0.024e+032PsAffx.C4000080_atPsAffx.C4000080--1e+1At3g33293-C.G.S.X.
0.014e+032PsAffx.C2000203_s_atPsAffx.C2000203--7e-2At5g03030DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
0.034e+032GmaAffx.86062.1.S1_atBM519816--1e-1At3g06350MEE32 (MATERNAL EFFECT EMBRYO ARREST 32)C.G.S.X.
0.034e+032GmaAffx.86062.1.S1_s_atBM519816--1e-1At3g06350MEE32 (MATERNAL EFFECT EMBRYO ARREST 32)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e+032Arabidopsis thalianaAt2g45640819172SAP18 (SIN3 ASSOCIATED POLYPEPTIDE P18)Involved in the regulation of salt stress. Expression of AtSAP18 is induced by NaCl, cold, drought, ABA, and ethylene treatment. AtSAP18 and HDA19 associate with ERF3 and ERF4 both in vitro and in vivo.---C.G.S.X.
0.055e+030Hordeum vulgareEBpi03_SQ003_J22_atEBpi03_SQ003_J22--2e+0At4g05100AtMYB74 (myb domain protein 74)C.G.S.X.
0.064e-756Oryza sativaOs12g0403800AK064189.1-3' exoribonuclease domain containing protein5e-2At3g077503' exoribonuclease family domain 1-containing proteinC.G.S.X.
0.094e-1271Populus trichocarpaPtpAffx.82205.1.A1_atCV256137hypothetical protein-1e-26At3g077503' exoribonuclease family domain 1-containing proteinC.G.S.X.
0.042e-136Triticum aestivumTaAffx.56697.1.S1_atCA646353--4e+0At5g02440unknown proteinC.G.S.X.
0.045e-236Vitis vinifera1610314_atCF515700--2e-1At4g14440HCD1 (3-HYDROXYACYL-COA DEHYDRATASE 1)C.G.S.X.
0.025e+030Zea maysZm.6916.1.S1_atAW067358hypothetical protein LOC100273981-9e-13At5g66750CHR1 (CHROMATIN REMODELING 1)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage