Gene omics information

Query gene ID Gma.13878.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.6Gma.13878.1.S1_atCD408791--5e+0At5g01070zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.6786.1GmaAffx.36562.2.S1_atBM731207--5e-15At1g14970unknown proteinS.X.H.G.
0.4463.3GmaAffx.73287.1.S1_atBI892641--9e-1At1g70440SRO3 (SIMILAR TO RCD ONE 3)S.X.H.G.
0.4463.3GmaAffx.39172.1.S1_atBM094230--2e-5At1g12340-S.X.H.G.
0.4463.3GmaAffx.51022.1.S1_atBM519886--9e-1At3g25920RPL15S.X.H.G.
0.4057.1GmaAffx.23963.1.S1_atBQ080815--3e+0At3g42310unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
1213.0100.0GSM308556Mature Soybean (Glycine max) pollen grains replicate 1GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
691.9100.0GSM308559Mature Soybean (Glycine max) pollen grains Replicate 2GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
571.0100.0GSM308560Mature Soybean (Glycine max) pollen grains Replicate 3GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
3.997.1GSM238052Soybean-PS46R-1-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
3.596.6GSM238053Soybean-PS46R-2-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
2.995.4GSM245936Leaf_LCO treated_Rep 1_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
2.292.8GSM209597susceptible_24hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
1.990.9GSM29220870_C004.1A.R9A1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
1.688.1GSM209596resistant_24hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
1.586.8GSM238061Soybean-S03W4-5-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.053e-550GmaAffx.24910.1.S1_atCA937678--8e-1At4g08028-C.G.S.X.
0.043e-550Gma.4318.1.S1_atCD413372--3e-1At1g70895CLE17 (CLAVATA3/ESR-RELATED 17)C.G.S.X.
0.043e-550Gma.1800.1.S1_s_atCD409801--3e-1At3g22160VQ motif-containing proteinC.G.S.X.
0.027e-342PsAffx.CL332Contig1_atPsAffx.CL332Contig1--7e-1At5g51120PABN1 (POLYADENYLATE-BINDING PROTEIN 1)C.G.S.X.
0.047e-342Gma.10573.3.S1_atCA938507--9e-1At3g51080zinc finger (GATA type) family proteinC.G.S.X.
0.031e-138PsAffx.C484000003_atPsAffx.C484000003--7e+0At5g53940yippee family proteinC.G.S.X.
0.031e-138GmaAffx.93082.1.S1_atCF808807--2e-14At1g488603-phosphoshikimate 1-carboxyvinyltransferase, putative / 5-enolpyruvylshikimate-3-phosphate, putative / EPSP synthase, putativeC.G.S.X.
0.031e-138Gma.10573.1.S1_atAW309612--1e-13At4g32890zinc finger (GATA type) family proteinC.G.S.X.
0.014e-136PsAffx.C79000066_atPsAffx.C79000066--3e+0At5g35430bindingC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e+032Arabidopsis thalianaAt5g01070831898zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMO---C.G.S.X.
0.052e-756Hordeum vulgareContig12044_atContig12044--1e-1At3g61660unknown proteinC.G.S.X.
0.052e-344Oryza sativaOs10g0162100AK062627.1-Hypothetical protein6e-2At3g14750unknown proteinC.G.S.X.
0.067e-652Populus trichocarpaPtpAffx.69294.2.S1_s_atAJ768330hypothetical protein-8e-5At1g55140RNA binding / ribonuclease IIIC.G.S.X.
0.071e-654Triticum aestivumTa.8826.1.A1_atCA642754--7e-2At1g63960unknown proteinC.G.S.X.
0.046e-340Vitis vinifera1607859_atCB339590hypothetical protein LOC100262522-2e-2At4g28290unknown proteinC.G.S.X.
0.048e-340Zea maysZm.10511.1.S1_atCF011340--1e+0At1g68765IDA (INFLORESCENCE DEFICIENT IN ABSCISSION)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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