Gene omics information

Query gene ID Gma.13295.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7087.1Gma.13295.1.S1_atCD412186--9e-46At5g53180PTB2 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 2)S.X.H.G.
0.6181.8Gma.10697.2.S1_atAW424151--5e-22At1g69960PP2A (SERINE/THREONINE PROTEIN PHOSPHATASE 2A)S.X.H.G.
0.4665.5GmaAffx.49094.1.S1_atBG155160--2e-2At4g12610transcription initiation factor IIF alpha subunit (TFIIF-alpha) family proteinS.X.H.G.
0.4563.9Gma.16655.1.S1_atCD403138--6e-6At2g41160ubiquitin-associated (UBA)/TS-N domain-containing proteinS.X.H.G.
0.4463.3Gma.8717.1.A1_s_atBU761149--3e-117At5g46630clathrin adaptor complexes medium subunit family proteinS.X.H.G.
0.4360.6Gma.2405.1.S1_atBU546336--3e+0At1g44835YbaK/prolyl-tRNA synthetase family proteinS.X.H.G.
0.3954.5Gma.11256.1.S1_atCD401123--7e-28At1g56450PBG1S.X.H.G.
0.3853.3Gma.11232.1.S1_s_atBI943460--0At5g19990RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)S.X.H.G.
0.3243.7GmaAffx.56354.2.S1_atBI426749--2e-21At3g03930protein kinase-relatedS.X.H.G.
0.3243.7Gma.15883.1.S1_x_atAF255338.120S proteasome subunit-2e-86At1g53850PAE1S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.597.7GSM209590susceptible_48hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
4.497.6GSM209599susceptible_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.696.7GSM209589resistant_48hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.596.6GSM209577susceptible_12hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.396.2GSM209598resistant_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.296.0GSM209581susceptible_48hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
2.995.4GSM209587resistant_24hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
2.995.4GSM209580resistant_48hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
2.493.8GSM209588susceptible_24hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
2.493.8GSM209597susceptible_24hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.551e-131470Gma.7910.1.S1_atBG352905--2e+0At2g30766unknown proteinC.G.S.X.
0.225e-48192GmaAffx.12941.1.S1_atBE823750--2e-14At5g53180PTB2 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 2)C.G.S.X.
0.107e-29129GmaAffx.87941.1.S1_atBU926195--3e-85At5g53180PTB2 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 2)C.G.S.X.
0.022e-138GmaAffx.87406.1.S1_atBM528748--2e-97At5g05170CEV1 (CONSTITUTIVE EXPRESSION OF VSP 1)C.G.S.X.
0.013e+034PsAffx.C40000041_atPsAffx.C40000041--2e-1At3g19900unknown proteinC.G.S.X.
0.023e+034HgAffx.17457.1.S1_atCB278899--1e-1At4g25080CHLM (magnesium-protoporphyrin IX methyltransferase)C.G.S.X.
0.023e+034GmaAffx.66529.1.S1_atBI498168--1e+0At3g47350short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.023e+034GmaAffx.51502.1.S1_atBM094491--3e-6At1g28960ATNUDX15 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 15)C.G.S.X.
0.023e+034Gma.7958.1.S1_atBU551362--2e-6At1g64080unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.279e-46184Arabidopsis thalianaAt5g53180835399PTB2 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 2)Encodes one of the two polypyrimidine tract-binding (PTB) protein homologs in the Arabidopsis genome. Double mutants have defects in pollen germination.---C.G.S.X.
0.076e-238Hordeum vulgareContig1730_s_atContig1730--4e-19At3g01150PTB1 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 1)C.G.S.X.
0.143e-1997Oryza sativaOs08g0436000AK067548.1-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein2e-32At3g01150PTB1 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 1)C.G.S.X.
0.201e-54214Populus trichocarpaPtpAffx.27193.1.A1_atCV272397hypothetical protein-2e-23At5g53180PTB2 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 2)C.G.S.X.
0.101e-1171Triticum aestivumTa.4729.1.S1_atBJ273107--1e-27At3g01150PTB1 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 1)C.G.S.X.
0.092e-25115Vitis vinifera1612771_atCF210342--5e-16At5g53180PTB2 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 2)C.G.S.X.
0.146e-857Zea maysZm.10060.1.A1_atCK371531hypothetical protein LOC100217199-9e-18At3g01150PTB1 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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