Gene omics information

Query gene ID Gma.1326.3.S1_at
Gene name pectate lyase precursor
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8091.5Gma.1326.3.S1_atAI442263pectate lyase precursor-1e-47At4g24780pectate lyase family proteinS.X.H.G.
0.6786.1GmaAffx.12649.1.S1_s_atAW309146--3e-10At4g24780pectate lyase family proteinS.X.H.G.
0.6786.1GmaAffx.13717.1.S1_atBI316021--2e-63At5g63180pectate lyase family proteinS.X.H.G.
0.5374.2Gma.1326.1.S1_atCD397515pectate lyase precursor-1e-6At1g67750pectate lyase family proteinS.X.H.G.
0.4463.3GmaAffx.82574.1.S1_atBE806391--9e-1At5g60260unknown proteinS.X.H.G.
0.3142.2Gma.5785.2.S1_atBU926461Clone pSC8a endo-1,4-beta-glucanase (cel8)-1e-15At4g11050AtGH9C3 (Arabidopsis thaliana glycosyl hydrolase 9C3)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
19.899.7GSM2449226_CON.M3W4.CEL, Experimental replicate 4GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
15.499.6GSM24480717_CON.M2W3.CEL, Experimental replicate 3GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
13.899.5GSM24491140_SLO.M2W3.CEL, Experimental replicate 3GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
12.999.5GSM24479514_CON.M3W3.CEL, Experimental replicate 3GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
12.799.5GSM2449328_V71.M2W3.CEL, Experimental replicate 3GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
12.699.5GSM2449277_SLO.M3W3.CEL, Experimental replicate 3GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
11.499.4GSM29414611_2345.2H.R292L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.699.3GSM29347965_C099.1R.SLR2U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.299.3GSM24482721_SLO.M3W4.CEL, Experimental replicate 4GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
10.099.3GSM24487933_CON.I5L3.CEL, Experimental replicate 3GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.383e-55216GmaAffx.13717.1.S1_atBI316021--2e-63At5g63180pectate lyase family proteinC.G.S.X.
0.345e-26119GmaAffx.12649.1.S1_s_atAW309146--3e-10At4g24780pectate lyase family proteinC.G.S.X.
0.042e-344GmaAffx.77902.1.S1_atAI735891--7e-2At5g04310pectate lyase family proteinC.G.S.X.
0.031e-138Gma.11298.3.S1_a_atBE059139--9e-100At4g13710pectate lyase family proteinC.G.S.X.
0.015e-136PsAffx.C38000106_atPsAffx.C38000106--8e-2At1g72710CKL2 (CASEIN KINASE 1-LIKE PROTEIN 2)C.G.S.X.
0.015e-136PsAffx.C219000010_atPsAffx.C219000010--2e-1At5g67300MYBR1 (MYB DOMAIN PROTEIN R1)C.G.S.X.
0.035e-136GmaAffx.76823.1.S1_atBF425217--4e-37At5g64960CDKC2 (Cyclin dependent kinase group C 2)C.G.S.X.
0.035e-136Gma.16839.1.A1_atBU547442--8e-11At5g14530transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.012e+034PsAffx.C20000068_atPsAffx.C20000068--8e-1At4g28750PSAE-1 (PSA E1 KNOCKOUT)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.281e-47190Arabidopsis thalianaAt4g24780828580pectate lyase family proteinF:lyase activity, pectate lyase activity;P:biological_process unknown;C:membrane;PBFO---C.G.S.X.
0.071e-240Hordeum vulgareContig11004_atContig11004--3e-22At3g07010pectate lyase family proteinC.G.S.X.
0.078e-446Oryza sativaOs04g0137100AK060609.1-Pectate lyase (Fragment)8e-6At3g07010pectate lyase family proteinC.G.S.X.
0.405e-72272Populus trichocarpaPtpAffx.208266.1.S1_s_atpmrna16449hypothetical protein-9e-25At3g27400pectate lyase family proteinC.G.S.X.
0.063e-550Triticum aestivumTaAffx.50373.1.S1_atCA741910--7e-2At1g67750pectate lyase family proteinC.G.S.X.
0.312e-28125Vitis vinifera1607945_atAF243475.1pectate lyase-1e-39At1g67750pectate lyase family proteinC.G.S.X.
0.097e-444Zea maysZmAffx.854.1.A1_atAI770665--8e-7At5g48900pectate lyase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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