Gene omics information

Query gene ID	Gma.1324.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.6	Gma.1324.1.S1_at	BE658235	-	-	1e-131	At4g35950	ARAC6 (ARABIDOPSIS RAC-LIKE 6)	S.X.	H.G.	Please select
0.80	91.5	Gma.7774.1.S1_at	CD401719	-	-	1e-26	At3g10540	3-phosphoinositide-dependent protein kinase, putative	S.X.	H.G.	Please select
0.80	91.5	Gma.15367.1.S1_at	CD412241	-	-	7e-60	At3g59910	-	S.X.	H.G.	Please select
0.73	88.9	Gma.1913.1.S1_at	BI970928	-	-	0	At2g37620	ACT1 (ACTIN 1)	S.X.	H.G.	Please select
0.71	87.8	Gma.2135.1.S1_a_at	BE660424	-	-	7e-1	At3g26400	EIF4B1	S.X.	H.G.	Please select
0.33	46.1	Gma.7046.1.S1_at	AI960403	-	-	4e-54	At5g47520	AtRABA5a (Arabidopsis Rab GTPase homolog A5a)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
262.4	100.0	GSM308556	Mature Soybean (Glycine max) pollen grains replicate 1	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
228.9	100.0	GSM308559	Mature Soybean (Glycine max) pollen grains Replicate 2	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
179.8	100.0	GSM308560	Mature Soybean (Glycine max) pollen grains Replicate 3	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
7.2	98.9	GSM258497	Soybean Shoot Apical Meristem, 1 short-day treatment	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
6.9	98.8	GSM258498	Soybean shoot apical meristem, 2 short-day treatment	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
6.1	98.5	GSM258504	Soybean shoot apical meristem, 4 short-day replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
6.0	98.5	GSM258496	Vegetative soybean shoot apical meristem	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
5.8	98.4	GSM258501	Soybean shoot apical meristem, 1 short-day treatment replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
5.6	98.3	GSM258503	Soybean shoot apical meristem, 2 short-day replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
5.5	98.3	GSM258499	Soybean shoot apical meristem, 4 short-day treatment	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.44	0	743	GmaAffx.91935.1.S1_at	CF807660	-	-	1e-43	At3g51300	ROP1 (RHO-RELATED PROTEIN FROM PLANTS 1)	C.G.	S.X.	Please select
0.43	5e-175	615	Gma.1324.2.S1_s_at	BG352137	-	-	8e-51	At4g35950	ARAC6 (ARABIDOPSIS RAC-LIKE 6)	C.G.	S.X.	Please select
0.43	5e-175	615	Gma.1324.2.S1_at	BG352137	-	-	8e-51	At4g35950	ARAC6 (ARABIDOPSIS RAC-LIKE 6)	C.G.	S.X.	Please select
0.39	3e-90	333	Gma.16292.1.S1_at	CD402759	-	-	5e-60	At4g35950	ARAC6 (ARABIDOPSIS RAC-LIKE 6)	C.G.	S.X.	Please select
0.36	2e-69	264	Gma.1807.1.S1_at	BE821399	-	-	6e-75	At1g75840	ARAC5 (RAC-LIKE GTP BINDING PROTEIN 5)	C.G.	S.X.	Please select
0.35	8e-66	252	GmaAffx.92012.1.S1_at	CF807737	-	-	4e-81	At1g75840	ARAC5 (RAC-LIKE GTP BINDING PROTEIN 5)	C.G.	S.X.	Please select
0.26	2e-51	204	Gma.1807.2.S1_s_at	BG881526	-	-	1e-55	At1g75840	ARAC5 (RAC-LIKE GTP BINDING PROTEIN 5)	C.G.	S.X.	Please select
0.26	5e-39	163	Gma.16292.2.A1_at	CF922911	-	-	5e-33	At1g20090	ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2)	C.G.	S.X.	Please select
0.26	5e-39	163	Gma.16292.2.S1_a_at	BG881987	-	-	5e-33	At1g20090	ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.54	1e-131	470	Arabidopsis thaliana	At4g35950	829750	ARAC6 (ARABIDOPSIS RAC-LIKE 6)	A member of ROP GTPases gene family-like. GTP binding protein Arac6.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.25	3e-35	149	Hordeum vulgare	Contig5202_at	Contig5202	-	-	2e-62	At1g20090	ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2)	C.G.	S.X.	Please select
0.36	8e-76	286	Oryza sativa	Os02g0834000	AF218381.1	-	Rop4 small GTP binding protein	1e-72	At4g35020	ARAC3 (ARABIDOPSIS RAC-LIKE 3)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.40	3e-142	506	Populus trichocarpa	Ptp.2292.1.A1_at	CV232695	hypothetical protein	-	4e-125	At4g35950	ARAC6 (ARABIDOPSIS RAC-LIKE 6)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.27	3e-24	113	Triticum aestivum	Ta.10240.1.S1_at	CD454934	-	-	4e-42	At4g35020	ARAC3 (ARABIDOPSIS RAC-LIKE 3)	C.G.	S.X.	Please select
0.45	3e-111	400	Vitis vinifera	1606720_at	CD800244	hypothetical protein LOC100253703	-	8e-111	At1g20090	ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2)	C.G.	S.X.	Please select
0.34	7e-42	171	Zea mays	Zm.449.1.S1_at	AF126055.1	Rho-related protein from plants 4	-	6e-81	At4g35020	ARAC3 (ARABIDOPSIS RAC-LIKE 3)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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