Gene omics information

Query gene ID	Gma.13160.1.S1_at
Gene name	ascorbate peroxidase 1, cytosolic
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.6	Gma.13160.1.S1_at	L10292.1	ascorbate peroxidase 1, cytosolic	-	5e-23	At1g07890	APX1 (ascorbate peroxidase 1)	S.X.	H.G.	Please select
0.50	71.7	Gma.14354.1.S1_at	AW755388	-	-	3e-67	At3g53610	ATRAB8	S.X.	H.G.	Please select
0.42	59.3	Gma.14354.1.S1_x_at	AW755388	-	-	3e-67	At3g53610	ATRAB8	S.X.	H.G.	Please select
0.40	57.1	Gma.6150.2.S1_s_at	CD416056	-	-	1e-23	At5g59880	ADF3 (ACTIN DEPOLYMERIZING FACTOR 3)	S.X.	H.G.	Please select
0.33	46.1	GmaAffx.93393.1.S1_s_at	CF808604	ascorbate peroxidase 1, cytosolic /// L-ascorbate peroxidase 2	-	6e-22	At1g07890	APX1 (ascorbate peroxidase 1)	S.X.	H.G.	Please select
0.25	32.6	Gma.10826.5.S1_x_at	BM732455	-	-	2e-108	At5g55190	RAN3 (RAN GTPASE 3)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.2	96.0	GSM293333	22_1549.1Q.R078L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.6	94.5	GSM244919	5_CON.M1W1.CEL, Experimental replicate 1	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
2.6	94.5	GSM244810	18_SLO.I1W1.CEL, Experimental replicate 1	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
2.5	94.2	GSM244856	28_V71.I1W2.CEL, Experimental replicate 2	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
2.5	94.2	GSM244926	7_SLO.I1W4.CEL, Experimental replicate 4	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
2.4	93.8	GSM244788	12_V71.M1W1.CEL, Experimental replicate 1	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
2.4	93.8	GSM244799	15_CON.M1W2.CEL, Experimental replicate 2	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
2.4	93.8	GSM292217	81-C005.1A.SLA1U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.4	93.8	GSM244798	15_CON.I3U1.CEL, Experimental replicate 1	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
2.4	93.8	GSM293346	34_1550.1Q.R078P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.83	0	1443	GmaAffx.89703.1.A1_at	CK606389	ascorbate peroxidase 1, cytosolic /// L-ascorbate peroxidase 2	-	3e-24	At1g07890	APX1 (ascorbate peroxidase 1)	C.G.	S.X.	Please select
0.83	0	1443	GmaAffx.89703.1.S1_at	CK606389	Ascorbate peroxidase 2 (APx2)	-	3e-24	At1g07890	APX1 (ascorbate peroxidase 1)	C.G.	S.X.	Please select
0.81	0	1340	GmaAffx.93393.1.S1_s_at	CF808604	ascorbate peroxidase 1, cytosolic /// L-ascorbate peroxidase 2	-	6e-22	At1g07890	APX1 (ascorbate peroxidase 1)	C.G.	S.X.	Please select
0.14	1e-54	214	GmaAffx.86592.2.A1_at	BI119573	Ascorbate peroxidase	-	2e-4	At4g35000	APX3 (ASCORBATE PEROXIDASE 3)	C.G.	S.X.	Please select
0.22	1e-54	214	GmaAffx.86592.2.S1_at	CA853313	Ascorbate peroxidase	-	2e-4	At4g35000	APX3 (ASCORBATE PEROXIDASE 3)	C.G.	S.X.	Please select
0.10	9e-47	188	Gma.17489.1.S1_at	CD401597	-	-	1e-1	At4g16140	proline-rich family protein	C.G.	S.X.	Please select
0.16	7e-26	119	GmaAffx.65918.1.A1_at	CD412482	ascorbate peroxidase 1, cytosolic	-	4e-1	At2g23970	defense-related protein, putative	C.G.	S.X.	Please select
0.06	2e-16	87	GmaAffx.86592.1.A1_at	BM094190	-	-	2e-1	At4g35000	APX3 (ASCORBATE PEROXIDASE 3)	C.G.	S.X.	Please select
0.06	2e-16	87	GmaAffx.86592.1.S1_at	BI273655	-	-	2e-1	At4g35000	APX3 (ASCORBATE PEROXIDASE 3)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.41	5e-23	109	Arabidopsis thaliana	At1g07890	837304	APX1 (ascorbate peroxidase 1)	Encodes a cytosolic ascorbate peroxidase APX1. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. At least part of the induction of heat shock proteins during light stress in Arabidopsis is mediated by H2O2 that is scavenged by APX1. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.20	2e-14	79	Hordeum vulgare	Contig1728_at	Contig1728	-	-	1e-14	At1g07890	APX1 (ascorbate peroxidase 1)	C.G.	S.X.	Please select
0.25	3e-13	77	Oryza sativa	Os07g0694700	AB050724.1	-	Ascorbate peroxidase (EC 1.11.1.11)	4e-25	At1g07890	APX1 (ascorbate peroxidase 1)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.36	7e-29	129	Populus trichocarpa	PtpAffx.5471.1.A1_a_at	CV252337	hypothetical protein	-	3e-15	At3g09640	APX2 (ASCORBATE PEROXIDASE 2)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.19	7e-10	65	Triticum aestivum	Ta.27473.1.S2_at	BQ162727	-	-	1e-16	At1g07890	APX1 (ascorbate peroxidase 1)	C.G.	S.X.	Please select
0.10	9e-25	113	Vitis vinifera	1606498_s_at	CF214775	ascorbate peroxidase	-	7e-22	At3g09640	APX2 (ASCORBATE PEROXIDASE 2)	C.G.	S.X.	Please select
0.32	3e-10	65	Zea mays	Zm.76.1.A1_at	BG842749	ascorbate peroxidase2	-	3e-27	At1g07890	APX1 (ascorbate peroxidase 1)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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