Gene omics information

Query gene ID Gma.12825.1.A1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6382.9Gma.12825.1.A1_atCD391595--1e+1At3g18715IDL4 (INFLORESCENCE DEFICIENT IN ABSCISSION (IDA)-LIKE 4)S.X.H.G.
0.8091.5Gma.11541.2.S1_atBI945664--1e+1At3g09290TAC1 (TELOMERASE ACTIVATOR1)S.X.H.G.
0.5071.7Gma.15705.1.S1_atBI971354--2e-19At1g18450ATARP4S.X.H.G.
0.4057.1Gma.16861.1.A1_atCD401560--7e-1At3g46180UTR5 (UDP-GALACTOSE TRANSPORTER 5)S.X.H.G.
0.3040.4Gma.15509.2.A1_atCD398971--7e-1At4g09012-S.X.H.G.
0.1316.3Gma.6467.2.A1_atCD412680MSI1-2e-11At5g58230MSI1 (MULTICOPY SUPRESSOR OF IRA1)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
55.899.9GSM201130Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 3GSE7511Expression data from soybean seed compartments with embryos at the heart stage
41.399.9GSM191080Soybean_Cotyledon_ES2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
41.299.9GSM201102Laser capture microdissected (LCM) axis root meristem at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
40.999.9GSM182031Laser capture microdissected (LCM) embryo proper at the heart stage, biological replicate 3GSE7511Expression data from soybean seed compartments with embryos at the heart stage
40.699.9GSM191083Soybean_Cotyledon_EPD1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
40.199.9GSM147933Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stage
39.899.9GSM191079Soybean_Cotyledon_ES1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
36.299.9GSM182046Laser capture microdissected (LCM) outer integument at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stage
35.199.9GSM182048Whole Seed at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stage
32.499.9GSM147934Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stage
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e-240Gma.17702.1.S1_atCD414209--1e-1At4g39500CYP96A11C.G.S.X.
0.043e-136GmaAffx.3884.1.A1_atBU550357--5e+0At1g48200unknown proteinC.G.S.X.
0.021e+034GmaAffx.67038.1.S1_atBE022668--3e-9At1g47710serpin, putative / serine protease inhibitor, putativeC.G.S.X.
0.041e+034GmaAffx.36294.1.S1_s_atBG652547--1e+1At4g03070AOP1C.G.S.X.
0.021e+034Gma.8191.1.S1_atCB063427--8e-3At4g24210SLY1 (SLEEPY1)C.G.S.X.
0.021e+034Gma.8191.1.A1_atBQ094320--8e-3At4g24210SLY1 (SLEEPY1)C.G.S.X.
0.051e+034Gma.14044.1.A1_atCD414064--3e+0At3g1678060S ribosomal protein L19 (RPL19B)C.G.S.X.
0.034e+032HgAffx.6211.1.A1_atCB826000--4e+0At4g32580thioredoxin family proteinC.G.S.X.
0.034e+032HgAffx.6211.1.S1_atCK349203--4e+0At4g32580thioredoxin family proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e+130Arabidopsis thalianaAt3g187155008010IDL4 (INFLORESCENCE DEFICIENT IN ABSCISSION (IDA)-LIKE 4)Similar to Inflorescance deficient in abscission (IDA). Involved in floral organ abscission.---C.G.S.X.
0.052e+032Hordeum vulgareEBro08_SQ009_J21_atEBro08_SQ009_J21--8e-1At3g19090RNA-binding protein, putativeC.G.S.X.
0.052e+034Oryza sativaOs02g01417009630.m00403--3e+0At2g28330unknown proteinC.G.S.X.
0.052e-240Populus trichocarpaPtpAffx.32788.1.S1_atCK090934--1e+0At5g58390peroxidase, putativeC.G.S.X.
0.042e-136Triticum aestivumTaAffx.78907.1.S1_atCA724897--3e+0At5g65495unknown proteinC.G.S.X.
0.052e-134Vitis vinifera1619118_atCF568807--1e+0At5g03920unknown proteinC.G.S.X.
0.041e+032Zea maysZm.6849.1.A1_atAI065467hypothetical protein LOC100275227-4e+0At5g01380transcription factorC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage