Gene omics information

Query gene ID Gma.12040.4.A1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7187.8Gma.12040.4.A1_atCA785568--2e-4At4g39870-S.X.H.G.
0.7187.8GmaAffx.90368.1.A1_atCF808748--3e-21At5g19140AILP1S.X.H.G.
0.5374.2GmaAffx.90238.1.A1_atCF805963--1e-32At5g18110NCBP (NOVEL CAP-BINDING PROTEIN)S.X.H.G.
0.5374.2GmaAffx.93609.1.S1_atCF809334--1e-37At3g02290zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.5273.1GmaAffx.91786.1.A1_atCF809185--5e-26At1g04750VAMP721 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 721)S.X.H.G.
0.3650.8Gma.10084.2.A1_atBE658821--1e+0At3g10974unknown proteinS.X.H.G.
0.2532.6GmaAffx.90951.1.S1_atCF806676--3e-1At2g30985unknown proteinS.X.H.G.
0.1923.7GmaAffx.92634.1.S1_atCF808359--3e-60At5g41340UBC4 (UBIQUITIN CONJUGATING ENZYME 4)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
30.299.8GSM29377218_2164.2D.R027P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
13.099.5GSM2922077-1011.1A.R007U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
12.099.4GSM2939115_2236.2E.R249P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.099.4GSM29289267_1464.1L.R282P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.999.3GSM29327660_C072.1P.V7P3P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.399.2GSM29328569_1226.1P.R138P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.399.2GSM2936103_3036.2B.SLB3P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.099.0GSM29328972_1238.1P.R145P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.398.9GSM29339074_1588.1Q.R230P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.298.9GSM29216924_1018.1A.R010P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.000845Gma.12040.4.S1_atAW569589--2e-4At4g39870-C.G.S.X.
1.000845Gma.12040.4.S1_x_atAW569589--2e-4At4g39870-C.G.S.X.
0.201e-49196Gma.12040.1.S1_atCA783276--2e-2At4g39870-C.G.S.X.
0.201e-49196Gma.12040.1.S1_a_atCA783276--2e-2At4g39870-C.G.S.X.
0.126e-27121GmaAffx.34498.1.S1_atBU544735--6e-1At3g14410transporter-relatedC.G.S.X.
0.145e-1271Gma.557.1.S1_atBQ473934--8e-1At1g56060unknown proteinC.G.S.X.
0.023e-136PsAffx.CL181Contig1_atPsAffx.CL181Contig1--4e-2At5g12360unknown proteinC.G.S.X.
0.043e-136GmaAffx.62766.1.S1_s_atBE583502--2e-2At5g12360unknown proteinC.G.S.X.
0.043e-136GmaAffx.11742.1.S1_atAW277329--6e-17At4g25610zinc finger (C2H2 type) family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.052e-446Arabidopsis thalianaAt4g39870830146-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBV---C.G.S.X.
0.032e+032Hordeum vulgareContig17097_atContig17097--8e-3At4g39870-C.G.S.X.
0.042e+034Oryza sativaOs02g0754000AK060979.1-TLDc domain containing protein3e+0At5g46610unknown proteinC.G.S.X.
0.234e-25115Populus trichocarpaPtpAffx.63654.1.S1_atCV232034hypothetical protein-3e-9At4g39870-C.G.S.X.
0.051e+130Triticum aestivumTaAffx.38275.1.A1_atBJ241798--1e+0At5g50200WR3 (WOUND-RESPONSIVE 3)C.G.S.X.
0.271e-27121Vitis vinifera1609316_atBQ795046hypothetical protein LOC100244322-1e-4At4g39870-C.G.S.X.
0.046e+030Zea maysZmAffx.421.1.A1_atAI676853--3e+0At3g28950avirulence-responsive protein-related / avirulence induced gene (AIG) protein-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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