Gene omics information

Query gene ID Gma.1178.1.S1_a_at
Gene name plasma membrane Ca2+-ATPase
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8592.8Gma.1178.1.S1_a_atAF195029.1plasma membrane Ca2+-ATPase-2e-74At1g27770ACA1 (AUTO-INHIBITED CA2+-ATPASE 1)S.X.H.G.
0.3954.5Gma.6698.1.A1_atCD404076--8e-6At5g18410PIR121S.X.H.G.
0.3650.8Gma.14259.1.A1_atCD418655--1e+1At5g48657defense protein-relatedS.X.H.G.
0.3650.8Gma.17927.1.S1_atBF066254--1e-64At4g35335nucleotide-sugar transmembrane transporter/ sugar:hydrogen symporterS.X.H.G.
0.2939.0Gma.16878.1.S1_atAW756422--4e+0At5g37930seven in absentia (SINA) family proteinS.X.H.G.
0.2839.0Gma.15153.1.S1_atCD402473--6e-7At1g53050protein kinase family proteinS.X.H.G.
0.2839.0Gma.1807.1.S1_atBE821399--6e-75At1g75840ARAC5 (RAC-LIKE GTP BINDING PROTEIN 5)S.X.H.G.
0.2839.0GmaAffx.317.1.S1_atBE820513--5e-12At1g43580unknown proteinS.X.H.G.
0.2532.6Gma.6867.1.S1_atBU545573--1e-1At5g54440unknown proteinS.X.H.G.
0.2430.9GmaAffx.53682.1.S1_atBU544304--4e-3At1g28340AtRLP4 (Receptor Like Protein 4)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.199.5GSM201124Laser capture microdissected (LCM) seed coat palisade at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
9.099.2GSM201125Laser capture microdissected (LCM) seed coat palisade at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
8.699.1GSM191084Soybean_Cotyledon_EPD2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
7.698.9GSM147946Laser capture microdissected (LCM) epidermis at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stage
7.598.9GSM184828Whole Seed at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stage
7.398.9GSM201116Laser capture microdissected (LCM) cotyledon vascular bundle at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
6.898.7GSM184829Whole Seed at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stage
6.598.7GSM147952Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stage
6.198.5GSM147949Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stage
5.798.4GSM191090Soybean_Cotyledon_OI2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9806928Gma.1178.1.S1_atAF195029.1plasma membrane Ca2+-ATPase-2e-74At1g27770ACA1 (AUTO-INHIBITED CA2+-ATPASE 1)C.G.S.X.
0.229e-96353Gma.1178.2.S1_atAI856788plasma membrane Ca2+-ATPase-4e+0At3g18030ATHAL3AC.G.S.X.
0.402e-90335Gma.1047.1.S1_atAF195028.1plasma membrane Ca2+-ATPase-2e-64At2g22950calcium-transporting ATPase, plasma membrane-type, putative / Ca2+-ATPase, putative (ACA7)C.G.S.X.
0.081e-42176GmaAffx.57032.1.A1_atAI856432plasma membrane Ca2+-ATPase-2e-1At2g33810SPL3 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 3)C.G.S.X.
0.096e-23111Gma.6344.1.S1_s_atBU765544--5e-63At2g41560ACA4 (AUTO-INHIBITED CA(2+)-ATPASE, ISOFORM 4)C.G.S.X.
0.031e-1173Gma.541.1.S1_atAW156279--5e-70At5g57110ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8)C.G.S.X.
0.071e-554Gma.3527.1.S1_atAW733755--7e-69At3g21180ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9)C.G.S.X.
0.017e-138Gma.7693.1.A1_atAW348250--7e-20At5g06360ribosomal protein S8e family proteinC.G.S.X.
0.017e-138Gma.7693.2.S1_atCD400086--6e-109At5g06360ribosomal protein S8e family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.442e-74282Arabidopsis thalianaAt1g27770839670ACA1 (AUTO-INHIBITED CA2+-ATPASE 1)Encodes a chloroplast envelope Ca2+-ATPase with an N-terminal autoinhibitor.---C.G.S.X.
0.223e-84313Hordeum vulgareContig9357_atContig9357--2e-42At1g27770ACA1 (AUTO-INHIBITED CA2+-ATPASE 1)C.G.S.X.
0.306e-79297Oryza sativaOs12g0586600AK100436.1-Plasma membrane Ca2+-ATPase2e-59At2g22950calcium-transporting ATPase, plasma membrane-type, putative / Ca2+-ATPase, putative (ACA7)C.G.S.X.
0.376e-72274Populus trichocarpaPtpAffx.203064.1.S1_atpmrna6068autoinhibited calcium ATPase-3e-82At4g37640ACA2 (CALCIUM ATPASE 2)C.G.S.X.
0.165e-38161Triticum aestivumTaAffx.50789.1.S1_atCA735312--3e-13At1g27770ACA1 (AUTO-INHIBITED CA2+-ATPASE 1)C.G.S.X.
0.313e-135482Vitis vinifera1613557_atBM436858--4e-66At4g37640ACA2 (CALCIUM ATPASE 2)C.G.S.X.
0.042e-757Zea maysZm.17277.1.S1_atCF273093--1e-45At5g57110ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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