CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Gma.1155.1.S1_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.6 Gma.1155.1.S1_at BE805343 - - 6e-6 At1g13750 calcineurin-like phosphoesterase family protein S.X. H.G.
0.44 63.3 GmaAffx.31477.1.A1_at CA784780 - - 7e-57 At4g30020 subtilase family protein S.X. H.G.
0.44 63.3 GmaAffx.52789.1.S1_at AW203783 - - 2e-10 At2g20990 SYTA (SYNAPTOTAGMIN A) S.X. H.G.
0.33 46.1 GmaAffx.80511.1.S1_at AW755736 - - 1e+0 At1g13760 unknown protein S.X. H.G.
0.20 25.1 Gma.13221.2.S1_at BU082968 - - 1e+0 At1g51390 NFU5 S.X. H.G.
0.18 22.3 GmaAffx.72298.1.S1_at BU764216 - - 8e-1 At4g12350 MYB42 (myb domain protein 42) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
7.2 98.9 GSM293604 34_2072.2B.R303P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.1 98.8 GSM293310 91_1180.1P.R110P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.7 98.7 GSM293594 25_2056.2B.R020P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.1 98.1 GSM293491 10_3002.2A.SLA1P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.0 98.0 GSM293307 89_1202.1P.R124P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.8 97.9 GSM293404 87_1582.1Q.R195P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.7 97.8 GSM293526 42_2022.2A.R275P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.6 97.7 GSM293398 81_1562.1Q.R140P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.6 97.7 GSM293346 34_1550.1Q.R078P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.5 97.7 GSM244816 19_V71.M2W4.CEL, Experimental replicate 4 GSE9687 Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.23 9e-9 61 Gma.15233.1.S1_at CD398582 - - 7e-66 At4g24890 PAP24 (PURPLE ACID PHOSPHATASE 24) C.G. S.X.
0.02 5e-1 36 PsAffx.C65000091_at PsAffx.C65000091 - - 1e-1 At4g28300 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.00 5e-1 36 PsAffx.C14000038_at PsAffx.C14000038 - - 1e-1 At1g49270 protein kinase family protein C.G. S.X.
0.03 5e-1 36 GmaAffx.49245.1.S1_at BU544545 - - 5e+0 At4g29290 LCR26 (Low-molecular-weight cysteine-rich 26) C.G. S.X.
0.02 5e-1 36 Gma.5062.1.A1_at AI856082 - - 1e-1 At3g46640 PCL1 (PHYTOCLOCK 1) C.G. S.X.
0.02 5e-1 36 Gma.5062.1.S1_at BI970710 - - 1e-1 At3g46640 PCL1 (PHYTOCLOCK 1) C.G. S.X.
0.01 2e+0 34 PsAffx.C6000085_at PsAffx.C6000085 - - 4e-1 At5g05230 ubiquitin-protein ligase C.G. S.X.
0.02 2e+0 34 Gma.9829.2.S1_at AI748648 - - 7e-75 At3g09200 60S acidic ribosomal protein P0 (RPP0B) C.G. S.X.
0.02 2e+0 34 Gma.9829.2.S1_x_at AI748648 - - 7e-75 At3g09200 60S acidic ribosomal protein P0 (RPP0B) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.16 6e-6 52 Arabidopsis thaliana At1g13750 837935 calcineurin-like phosphoesterase family protein F:hydrolase activity, protein serine/threonine phosphatase activity, metal ion binding, acid phosphatase activity;P:biological_process unknown;C:endomembrane system;PBOMF - - - C.G. S.X.
0.16 5e-20 97 Hordeum vulgare Contig12113_at Contig12113 - - 4e-5 At4g24890 PAP24 (PURPLE ACID PHOSPHATASE 24) C.G. S.X.
0.14 2e-13 77 Oryza sativa Os12g0576600 AK121432.1 - Metallophosphoesterase domain containing protein 9e-23 At5g50400 PAP27 (PURPLE ACID PHOSPHATASE 27) C.G. S.X.
0.50 2e-77 289 Populus trichocarpa PtpAffx.35988.4.A1_a_at BU883315 - - 1e-7 At5g50400 PAP27 (PURPLE ACID PHOSPHATASE 27) C.G. S.X.
0.16 3e-17 89 Triticum aestivum Ta.8639.1.S1_at BQ162157 - - 1e-3 At1g13750 calcineurin-like phosphoesterase family protein C.G. S.X.
0.03 6e+0 30 Vitis vinifera 1611788_at CF510467 - - 3e+0 At5g10890 myosin heavy chain-related C.G. S.X.
0.02 2e+0 32 Zea mays Zm.17564.1.S1_at CK369792 AGG2 - 2e+0 At1g68585 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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