Gene omics information

Query gene ID Gma.11273.1.S1_s_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.98100.0Gma.11273.1.S1_s_atCD396662--2e-66At5g54960PDC2 (pyruvate decarboxylase-2)S.X.H.G.
0.3142.2Gma.7310.1.S1_atBQ630696--3e-18At4g33070pyruvate decarboxylase, putativeS.X.H.G.
0.2430.9Gma.4097.1.S1_atAW350249--2e-45At1g77120ADH1 (ALCOHOL DEHYDROGENASE 1)S.X.H.G.
0.2025.1Gma.574.1.S1_x_atAW310169--5e-6At4g37930SHM1 (SERINE TRANSHYDROXYMETHYLTRANSFERASE 1)S.X.H.G.
0.1923.7GmaAffx.56285.1.S1_atBE659649--2e-5At4g30850HHP2 (HEPTAHELICAL TRANSMEMBRANE PROTEIN2)S.X.H.G.
0.1923.7GmaAffx.13138.1.S1_atBF596324--3e-10At3g28480oxidoreductase, 2OG-Fe(II) oxygenase family proteinS.X.H.G.
0.1923.7GmaAffx.65627.1.S1_atBM085372--4e-1At1g56530hydroxyproline-rich glycoprotein family proteinS.X.H.G.
0.1721.2Gma.7310.1.S1_s_atBQ630696--3e-18At4g33070pyruvate decarboxylase, putativeS.X.H.G.
0.1619.7Gma.12597.1.A1_atCD392082--7e-1At1g74620zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.1619.7Gma.574.1.S1_atAW310169--5e-6At4g37930SHM1 (SERINE TRANSHYDROXYMETHYLTRANSFERASE 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
55.399.9GSM237069Soy_shoot apical meristem2GSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristem
27.199.8GSM237068Soy_shoot apical meristemGSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristem
16.199.6GSM309346transgenic RNAiOleosin, biol rep 2, tech rep 2GSE12300Suppression of oleosin in soybean cotyledon
15.799.6GSM191088Soybean_Cotyledon_II2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
13.699.5GSM191087Soybean_Cotyledon_II1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
13.699.5GSM309345transgenic RNAiOleosin, biol rep 2, tech rep 1GSE12300Suppression of oleosin in soybean cotyledon
12.399.5GSM267288Axillary meristem from 10-day-old soybean seedlings repliacte 2GSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristem
11.599.4GSM182043Laser capture microdissected (LCM) inner integument at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stage
11.199.4GSM182044Laser capture microdissected (LCM) inner integument at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stage
10.799.4GSM258502Vegetative shoot apical meristem, replicate BGSE10251Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.5401076GmaAffx.90704.1.S1_atCF806530--5e-25At4g33070pyruvate decarboxylase, putativeC.G.S.X.
0.221e-80301GmaAffx.91150.1.S1_atCF806875--3e-32At4g33070pyruvate decarboxylase, putativeC.G.S.X.
0.247e-33143Gma.7310.1.S1_atBQ630696--3e-18At4g33070pyruvate decarboxylase, putativeC.G.S.X.
0.247e-33143Gma.7310.1.S1_s_atBQ630696--3e-18At4g33070pyruvate decarboxylase, putativeC.G.S.X.
0.083e-1377GmaAffx.90000.1.S1_atCF805725--4e-22At5g54960PDC2 (pyruvate decarboxylase-2)C.G.S.X.
0.041e-346GmaAffx.83224.1.S1_atBQ629246--3e-13At5g01320pyruvate decarboxylase, putativeC.G.S.X.
0.013e-138PsAffx.CL59Contig1_atPsAffx.CL59Contig1--8e-1At5g46730glycine-rich proteinC.G.S.X.
0.021e+036PsAffx.CL2238Contig1_atPsAffx.CL2238Contig1--5e+0At2g4571040S ribosomal protein S27 (RPS27A)C.G.S.X.
0.021e+036GmaAffx.74080.1.S1_atAW156663--6e-3At1g65890AAE12 (ACYL ACTIVATING ENZYME 12)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.432e-66254Arabidopsis thalianaAt5g54960835587PDC2 (pyruvate decarboxylase-2)pyruvate decarboxylase-2---C.G.S.X.
0.304e-32139Hordeum vulgareContig5532_atContig5532--2e-16At5g01330PDC3 (pyruvate decarboxylase-3)C.G.S.X.
0.332e-31139Oryza sativaOs01g0160100AK069905.1-Pyruvate decarboxylase isozyme 2 (EC 4.1.1.1)(PDC) (Fragment)6e-21At5g01330PDC3 (pyruvate decarboxylase-3)C.G.S.X.
0.576e-172605Populus trichocarpaPtpAffx.3704.1.S1_atCV254514hypothetical protein-4e-64At5g54960PDC2 (pyruvate decarboxylase-2)C.G.S.X.
0.288e-29129Triticum aestivumTa.13281.1.S1_atBJ242429--2e-14At5g01320pyruvate decarboxylase, putativeC.G.S.X.
0.389e-109393Vitis vinifera1621682_s_atCF404793pyruvate decarboxylase 1-5e-52At5g54960PDC2 (pyruvate decarboxylase-2)C.G.S.X.
0.253e-1789Zea maysZm.3994.1.S1_atAF370005.1pyruvate decarboxylase3-2e-14At5g01320pyruvate decarboxylase, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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