Gene omics information

Query gene ID Gma.11254.1.S1_a_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6786.1Gma.11254.1.S1_a_atCD391589--9e+0At5g45040cytochrome c6 (ATC6)S.X.H.G.
0.8091.5GmaAffx.39605.1.S1_atBM178864--2e+0At2g41470unknown proteinS.X.H.G.
0.7790.3Gma.11254.1.S1_x_atCD391589--9e+0At5g45040cytochrome c6 (ATC6)S.X.H.G.
0.6080.7Gma.11367.1.S1_atAW598213--8e-3At5g16840BPA1 (BINDINGPARTNEROFACD11 1)S.X.H.G.
0.5071.7GmaAffx.1301.88.S1_s_atBG041563--4e-12At5g15600SP1L4 (SPIRAL1-LIKE4)S.X.H.G.
0.5071.7Gma.11254.3.S1_a_atBF069978--4e+0At4g13790auxin-responsive protein, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.999.0GSM238049Soybean-Mandarin-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
7.398.9GSM238047Soybean-Mandarin-1-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
7.198.8GSM191088Soybean_Cotyledon_II2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
7.098.8GSM238051Soybean-Mandarin-7-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
6.798.7GSM238048Soybean-Mandarin-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
6.098.5GSM191087Soybean_Cotyledon_II1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
5.998.5GSM182043Laser capture microdissected (LCM) inner integument at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stage
5.898.4GSM238050Soybean-Mandarin-6-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
5.698.3GSM238055Soybean-PS46R-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
5.398.2GSM238033Soybean-2601R-5-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.8801334Gma.11254.1.S1_x_atCD391589--9e+0At5g45040cytochrome c6 (ATC6)C.G.S.X.
0.600898Gma.11254.2.S1_atCD401279--6e+0At4g13790auxin-responsive protein, putativeC.G.S.X.
0.209e-84311Gma.11254.3.S1_a_atBF069978--4e+0At4g13790auxin-responsive protein, putativeC.G.S.X.
0.209e-84311Gma.11254.3.S1_x_atBF069978--4e+0At4g13790auxin-responsive protein, putativeC.G.S.X.
0.028e-446Gma.2961.1.S1_atCD415704--2e-4At1g22360AtUGT85A2 (UDP-glucosyl transferase 85A2)C.G.S.X.
0.023e-344GmaAffx.76093.1.S1_atBG045222--9e-2At4g00100ATRPS13A (ARABIDOPSIS THALIANA RIBOSOMAL PROTEIN S13A)C.G.S.X.
0.018e-136PsAffx.C148000012_atPsAffx.C148000012--6e+0At4g19350EMB3006 (embryo defective 3006)C.G.S.X.
0.028e-136GmaAffx.73824.1.S1_atBM526974--1e+0At4g14750IQD19 (IQ-domain 19)C.G.S.X.
0.013e+034PsAffx.C81000069_atPsAffx.C81000069--2e+0At3g4896060S ribosomal protein L13 (RPL13C)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.029e+032Arabidopsis thalianaAt5g45040834535cytochrome c6 (ATC6)F:electron carrier activity, iron ion binding, heme binding;P:unknown;C:unknown;BOP---C.G.S.X.
0.024e+032Hordeum vulgareHV06A23u_x_atHV06A23u--1e+1At5g54980integral membrane family proteinC.G.S.X.
0.015e-344Oryza sativaOs.56707.1.S1_at---0C.G.S.X.
0.045e-550Populus trichocarpaPtp.6581.1.S1_s_atCV260686hypothetical protein-3e-2At4g08685SAH7C.G.S.X.
0.032e+034Triticum aestivumTaAffx.113231.1.S1_atCA617071--4e+0At5g25940early nodulin-relatedC.G.S.X.
0.063e-1271Vitis vinifera1608493_atCF516947similar to F28K19.26-4e-1At1g29140pollen Ole e 1 allergen and extensin family proteinC.G.S.X.
0.021e+034Zea maysZm.5401.1.S1_atAI065471pollen-specific protein C13-5e-1At4g17500ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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