Gene omics information

Query gene ID Gma.10960.1.S1_s_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5576.3Gma.10960.1.S1_s_atBQ453915--2e-29At1g20510OPCL1 (OPC-8:0 COA LIGASE1)S.X.H.G.
0.5071.7GmaAffx.93379.1.S1_s_atCF809104--2e-24At1g49670NQRS.X.H.G.
0.3650.8Gma.6885.1.A1_atBU545705--2e-2At3g51780ATBAG4 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 4)S.X.H.G.
0.3040.4GmaAffx.64117.1.S1_atBG239723--1e-5At1g67970AT-HSFA8S.X.H.G.
0.2329.9GmaAffx.2179.1.S1_atCD407818--6e-22At4g22990SPX (SYG1/Pho81/XPR1) domain-containing proteinS.X.H.G.
0.0811.0Gma.1106.1.S1_atCD416163--1e-1At5g53330-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.599.1GSM209597susceptible_24hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
5.598.3GSM29291386_1447.1L.R273L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.398.2GSM209596resistant_24hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
4.697.7GSM29290982_1447.1L.R273U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.297.4GSM17160812_Y.E.I.3, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
4.297.4GSM209587resistant_24hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.796.8GSM17163218_W.E.I.3, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
3.696.7GSM17166626_V.E.I.3, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
3.696.7GSM29228936_C081.1E.SLE2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.596.6GSM29284928_1443.1L.R271U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9902966Gma.10960.1.S1_atBQ453915--2e-29At1g20510OPCL1 (OPC-8:0 COA LIGASE1)C.G.S.X.
0.490987GmaAffx.93054.1.S1_atCF808779--1e-6At1g20510OPCL1 (OPC-8:0 COA LIGASE1)C.G.S.X.
0.022e-242GmaAffx.25818.1.S1_atBU549452--4e-1At1g12211unknown proteinC.G.S.X.
0.027e-240PsAffx.CL1152Contig1_s_atPsAffx.CL1152Contig1--4e+0At3g07525ATG10 (autophagy 10)C.G.S.X.
0.017e-240PsAffx.C106000035_atPsAffx.C106000035--4e-1At5g29210unknown proteinC.G.S.X.
0.013e-138PsAffx.C21000102_atPsAffx.C21000102--4e+0At5g11500unknown proteinC.G.S.X.
0.013e-138PsAffx.C130000029_atPsAffx.C130000029--3e-2At4g05030heavy-metal-associated domain-containing proteinC.G.S.X.
0.023e-138GmaAffx.92669.1.S1_atCF808394--8e-2At5g55640unknown proteinC.G.S.X.
0.023e-138GmaAffx.88329.1.S1_atBG359619--8e-2At2g46370JAR1 (JASMONATE RESISTANT 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.202e-29131Arabidopsis thalianaAt1g20510838639OPCL1 (OPC-8:0 COA LIGASE1)F:4-coumarate-CoA ligase activity;P:phenylpropanoid metabolic process, jasmonic acid biosynthetic process, response to wounding;C:peroxisome;BOFMPAV---C.G.S.X.
0.205e-25115Hordeum vulgareContig10937_atContig10937--3e-10At1g20490AMP-dependent synthetase and ligase family proteinC.G.S.X.
0.181e-1379Oryza sativaOs03g0132000AK105769.1-4-coumarate-CoA ligase-like protein2e-5At1g20490AMP-dependent synthetase and ligase family proteinC.G.S.X.
0.108e-2099Populus trichocarpaPtp.1382.1.A1_atCV258748acyl:coa ligase-5e-19At1g20510OPCL1 (OPC-8:0 COA LIGASE1)C.G.S.X.
0.134e-21103Triticum aestivumTaAffx.116735.1.S1_atCA609357--9e+0At2g42310unknown proteinC.G.S.X.
0.072e-1479Vitis vinifera1610552_atCF201894.1--5e-10At5g633804-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinC.G.S.X.
0.068e-238Zea maysZm.18403.1.A1_atBM072852hypothetical protein LOC100274307-5e-3At5g381204-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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