Gene omics information

Query gene ID Gma.10878.3.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5374.2Gma.10878.3.S1_atCA937700--3e-23At3g26730zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.6786.1GmaAffx.206.1.S1_s_atAW277657--2e-1At5g66090unknown proteinS.X.H.G.
0.5576.3GmaAffx.57700.1.S1_atAW781821--8e-20At1g75850VPS35B (VPS35 HOMOLOG B)S.X.H.G.
0.2939.0GmaAffx.7255.1.S1_atBE657500--3e-8At4g37460SRFR1 (SUPPRESSOR OF RPS4-RLD 1)S.X.H.G.
0.2126.6Gma.4305.3.S1_a_atBG044173--5e-8At5g57940ATCNGC5 (CYCLIC NUCLEOTIDE GATED CHANNEL 5)S.X.H.G.
0.0811.0GmaAffx.76624.1.S1_atCA939046--6e-10At4g31580SRZ-22S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.797.8GSM29292698_C204.1L.SLL1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.397.5GSM29387729_3084.2E.R9E2P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.796.8GSM2928227_C190.1K.SLK2P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.796.8GSM29387930_2202.2E.R190P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.696.7GSM29387628_3086.2E.SLE3P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.596.6GSM29363159_2060.2B.R199P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.596.6GSM2928116_1406.1K.R251P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.596.6GSM29430253_2400.2I.R178P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.496.4GSM29300075_C234.1M.SLM3P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.396.2GSM29339377_C086.1Q.SLQ3P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.012e+034PsAffx.C57000079_atPsAffx.C57000079--3e-2At5g08590SNRK2.1 (SNF1-RELATED PROTEIN KINASE 2.1)C.G.S.X.
0.012e+034PsAffx.C185000032_atPsAffx.C185000032--6e-5At1g516804CL1 (4-COUMARATE:COA LIGASE 1)C.G.S.X.
0.032e+034GmaAffx.64805.1.S1_atBM890890--2e-13At1g54280haloacid dehalogenase-like hydrolase family proteinC.G.S.X.
0.032e+034GmaAffx.60271.1.S1_atBM732817--9e-5At2g03880pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
0.012e+034Gma.16331.1.S1_s_atCD398581--7e-100At5g30510RPS1 (RIBOSOMAL PROTEIN S1)C.G.S.X.
0.032e+034Gma.1090.1.A1_atCD416795--5e+0At5g02020unknown proteinC.G.S.X.
0.017e+032PsAffx.C72000020_atPsAffx.C72000020--9e-1At2g28920zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.027e+032PsAffx.C34000105_atPsAffx.C34000105--1e-1At4g32175RNA bindingC.G.S.X.
0.007e+032PsAffx.C199000011_atPsAffx.C199000011--3e-1At3g17225invertase/pectin methylesterase inhibitor family proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.113e-23109Arabidopsis thalianaAt3g26730822285zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:biological_process unknown;C:chloroplast;OMFPBVA---C.G.S.X.
0.036e-134Hordeum vulgareHVSMEa0003I10r2_atHVSMEa0003I10r2--7e-1At5g55610unknown proteinC.G.S.X.
0.033e+034Oryza sativaOs.6645.1.S1_s_at---0C.G.S.X.
0.032e+034Populus trichocarpaPtpAffx.297.2.A1_a_atCV230228--2e-5At5g56590glycosyl hydrolase family 17 proteinC.G.S.X.
0.069e-238Triticum aestivumTa.7054.2.S1_atBJ245931--2e-12At3g26730zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.036e+030Vitis vinifera1620233_atCD800971--9e-1At3g52440Dof-type zinc finger domain-containing proteinC.G.S.X.
0.039e+030Zea maysZm.13169.1.A1_atCA405223--4e+0At1g10657unknown proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage