CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Gma.10818.2.S1_at

Gene name WRKY78

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.73 88.9 Gma.10818.2.S1_at AW568786 WRKY78 - 8e-23 At1g80840 WRKY40 S.X. H.G.
0.67 86.1 Gma.3730.2.S1_a_at BI320846 transcription factor - 9e-15 At1g80840 WRKY40 S.X. H.G.
0.60 80.7 GmaAffx.91768.1.S1_s_at CF807493 transcription factor - 1e-6 At2g25000 WRKY60 S.X. H.G.
0.55 76.3 GmaAffx.17284.1.A1_s_at BE659740 - - 2e+0 At5g14330 unknown protein S.X. H.G.
0.50 71.7 Gma.5519.3.S1_x_at AW459852 - - 6e-37 At5g63790 ANAC102 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 102) S.X. H.G.
0.50 71.7 Gma.5519.2.S1_at BM188080 - - 8e-19 At1g01720 ATAF1 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
12.1 99.5 GSM292228 23_1052.1B.R029P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.8 99.4 GSM292195 57_1024.1A.R013P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.8 99.4 GSM292208 70_C004.1A.R9A1P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.9 99.3 GSM293016 21_1058.1N.R033P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.7 99.3 GSM292451 51_1263.1G.R167U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.6 99.2 GSM292377 50_1228.1F.R139P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.4 99.2 GSM292400 75_1218.1F.R133P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.4 99.2 GSM292357 26_1233.1F.R143U, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.2 99.2 GSM292356 25_1234.1F.R143P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.1 99.2 GSM292214 78-1004.1A.R002P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.97 0 882 Gma.10818.2.S1_a_at AW568786 WRKY78 - 8e-23 At1g80840 WRKY40 C.G. S.X.
0.33 1e-59 230 Gma.10818.1.S1_at BE820324 WRKY78 - 1e-24 At1g80840 WRKY40 C.G. S.X.
0.26 1e-43 176 Gma.3730.2.S1_a_at BI320846 transcription factor - 9e-15 At1g80840 WRKY40 C.G. S.X.
0.17 4e-41 169 GmaAffx.91768.1.S1_at CF807493 transcription factor - 1e-6 At2g25000 WRKY60 C.G. S.X.
0.17 4e-41 169 GmaAffx.91768.1.S1_s_at CF807493 transcription factor - 1e-6 At2g25000 WRKY60 C.G. S.X.
0.18 6e-9 61 Gma.16733.2.S1_at BE803290 transcription factor - 1e-4 At1g80840 WRKY40 C.G. S.X.
0.29 1e-6 54 GmaAffx.68985.1.S1_at BM187736 WRKY17 protein - 9e-10 At1g80840 WRKY40 C.G. S.X.
0.06 1e-6 54 Gma.10818.3.S1_at BF070314 WRKY78 - 3e+0 At4g20420 tapetum-specific protein-related C.G. S.X.
0.07 9e-5 48 GmaAffx.21523.2.S1_at BE021411 - - 2e-25 At4g04450 WRKY42 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.20 8e-23 107 Arabidopsis thaliana At1g80840 844423 WRKY40 Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Coexpression with WRKY18 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two. - - - C.G. S.X.
0.04 2e+0 32 Hordeum vulgare HX13K24r_at HX13K24r - - 4e+0 At5g43170 AZF3 (ARABIDOPSIS ZINC-FINGER PROTEIN 3) C.G. S.X.
0.11 5e-7 56 Oryza sativa Os.12032.1.S1_at - - - 0 C.G. S.X.
0.21 3e-26 119 Populus trichocarpa PtpAffx.5224.2.A1_at CV258799 hypothetical protein - 1e-10 At2g25000 WRKY60 C.G. S.X.
0.05 6e-2 38 Triticum aestivum Ta.29394.1.S1_at CK207466 - - 4e-16 At2g37260 TTG2 (TRANSPARENT TESTA GLABRA 2) C.G. S.X.
0.13 6e-24 109 Vitis vinifera 1614806_s_at CB343751 hypothetical protein LOC100264507 - 2e-4 At2g25000 WRKY60 C.G. S.X.
0.03 6e+0 30 Zea mays ZmAffx.44.1.A1_at AI664910 - - 8e-1 At4g32060 calcium-binding EF hand family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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