CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Gma.10802.1.S1_a_at

Gene name Clone GMFP1 isoprenylated protein

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.6 Gma.10802.1.S1_a_at BI969275 Clone GMFP1 isoprenylated protein - 4e-12 At3g44110 ATJ3 S.X. H.G.
0.71 87.8 Gma.3568.2.S1_at BM308236 - - 3e-42 At2g44610 RAB6A S.X. H.G.
0.67 86.1 Gma.8407.1.S1_x_at AW348317 ADP-ribosylation factor - 9e-120 At2g47170 ARF1A1C S.X. H.G.
0.60 80.7 Gma.3568.1.S1_x_at BI941735 - - 1e-54 At5g10260 AtRABH1e (Arabidopsis Rab GTPase homolog H1e) S.X. H.G.
0.60 80.7 Gma.8407.1.S1_at AW348317 ADP-ribosylation factor - 9e-120 At2g47170 ARF1A1C S.X. H.G.
0.55 76.3 Gma.10261.1.S1_at BG839311 - - 2e-52 At3g27090 - S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.0 98.0 GSM292158 10_C010.1A.R9A2P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.7 97.8 GSM244814 19_SLO.M5W2.CEL, Experimental replicate 2 GSE9687 Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
4.7 97.8 GSM293247 34_C066.1P.R9P2P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.7 97.8 GSM293548 62_3010.2A.R9A2P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.4 97.6 GSM292258 78_C034.1B.R9B3P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.2 97.4 GSM171611 13_W.E.M.5, Experimental replicate W GSE7124 Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
4.1 97.3 GSM292890 65_C202.1L.R9L1P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.0 97.2 GSM293459 47_1596.1R.R009P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9 97.1 GSM292179 36_1014.1A.R008P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9 97.1 GSM171622 16_V.B.M.5, Experimental replicate V GSE7124 Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.44 0 1051 GmaAffx.90541.1.S1_s_at CF806266 - - 6e-18 At5g22060 ATJ2 C.G. S.X.
0.10 2e-9 65 Gma.1372.1.S1_at AW309996 - - 7e-51 At3g44110 ATJ3 C.G. S.X.
0.07 2e-6 56 Gma.1634.1.S1_at AF169022.1 seed maturation protein PM37 - 2e-45 At3g44110 ATJ3 C.G. S.X.
0.03 9e-5 50 GmaAffx.92027.1.S1_s_at CF806741 seed maturation protein PM37 - 4e-38 At5g22060 ATJ2 C.G. S.X.
0.01 9e-2 40 Gma.11929.1.S1_at AI437723 HMG-1 like protein gene - 2e-13 At1g20693 HMGB2 (HIGH MOBILITY GROUP B 2) C.G. S.X.
0.01 9e-2 40 Gma.11929.1.S1_x_at AI437723 HMG-1 like protein gene - 2e-13 At1g20693 HMGB2 (HIGH MOBILITY GROUP B 2) C.G. S.X.
0.01 3e-1 38 GmaAffx.37968.1.A1_at BU549698 - - 1e+0 At5g63150 unknown protein C.G. S.X.
0.01 3e-1 38 Gma.7484.2.S1_at AW396419 salt-tolerance protein - 5e-5 At2g31380 STH C.G. S.X.
0.00 1e+0 36 PsAffx.C73000080_at PsAffx.C73000080 - - 7e-2 At1g22110 structural constituent of ribosome C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.17 4e-12 73 Arabidopsis thaliana At3g44110 823531 ATJ3 homologous to the co-chaperon DNAJ protein from E coli - - - C.G. S.X.
0.22 2e-15 83 Hordeum vulgare Contig2826_at Contig2826 - - 1e-21 At3g44110 ATJ3 C.G. S.X.
0.24 6e-13 77 Oryza sativa Os04g0549600 AK061922.1 - Heat shock protein DnaJ family protein 7e-20 At5g22060 ATJ2 C.G. S.X.
0.47 9e-76 286 Populus trichocarpa PtpAffx.202126.1.S1_x_at pmrna4249 hypothetical protein - 6e-17 At5g22060 ATJ2 C.G. S.X.
0.22 2e-20 101 Triticum aestivum Ta.357.1.S1_at BJ239138 - - 8e-20 At5g22060 ATJ2 C.G. S.X.
0.14 2e-11 69 Vitis vinifera 1619225_s_at CA809011 hypothetical protein LOC100251979 - 5e-55 At3g44110 ATJ3 C.G. S.X.
0.23 8e-15 81 Zea mays Zm.6892.1.A1_at AY108160.1 hypothetical protein LOC100216704 - 7e-20 At5g22060 ATJ2 C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage