CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Gma.10800.1.S1_s_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.73 88.9 Gma.10800.1.S1_s_at AW202272 - - 3e-20 At1g15270 - S.X. H.G.
0.50 71.7 GmaAffx.89735.1.S1_at CK606323 - - 2e-5 At3g24100 - S.X. H.G.
0.50 71.7 GmaAffx.99.2.A1_s_at BE330213 Translationally controlled tumor-like protein - 3e-1 At3g26670 - S.X. H.G.
0.40 57.1 Gma.10800.2.S1_at CD407337 - - 3e-20 At1g15270 - S.X. H.G.
0.33 46.1 GmaAffx.92103.1.S1_s_at CF806493 translationally controlled tumor-like protein - 6e-28 At3g16640 TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN) S.X. H.G.
0.31 42.2 Gma.437.1.S1_s_at CD401627 Profilin, PRO2 - 1e-10 At2g19760 PRF1 (PROFILIN 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
17.5 99.7 GSM308560 Mature Soybean (Glycine max) pollen grains Replicate 3 GSE12286 Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
16.2 99.6 GSM308559 Mature Soybean (Glycine max) pollen grains Replicate 2 GSE12286 Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
12.7 99.5 GSM308556 Mature Soybean (Glycine max) pollen grains replicate 1 GSE12286 Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
6.1 98.5 GSM147941 Laser capture microdissected (LCM) endosperm at the globular stage, biological replicate 3 GSE6414 Expression data from soybean seed compartments with embryos at the globular stage
5.1 98.1 GSM147939 Laser capture microdissected (LCM) endosperm at the globular stage, biological replicate 1 GSE6414 Expression data from soybean seed compartments with embryos at the globular stage
4.6 97.7 GSM147937 Laser capture microdissected (LCM) suspensor at the globular stage, biological replicate 2 GSE6414 Expression data from soybean seed compartments with embryos at the globular stage
4.5 97.7 GSM182044 Laser capture microdissected (LCM) inner integument at the heart stage, biological replicate 2 GSE7511 Expression data from soybean seed compartments with embryos at the heart stage
4.0 97.2 GSM147940 Laser capture microdissected (LCM) endosperm at the globular stage, biological replicate 2 GSE6414 Expression data from soybean seed compartments with embryos at the globular stage
3.8 97.0 GSM147952 Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 2 GSE6414 Expression data from soybean seed compartments with embryos at the globular stage
3.7 96.8 GSM147946 Laser capture microdissected (LCM) epidermis at the globular stage, biological replicate 2 GSE6414 Expression data from soybean seed compartments with embryos at the globular stage
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.76 0 815 GmaAffx.89368.1.A1_s_at CK606550 - - 4e-19 At1g15270 - C.G. S.X.
0.76 0 815 GmaAffx.89368.1.S1_s_at CK606550 - - 4e-19 At1g15270 - C.G. S.X.
0.69 0 759 Gma.10800.2.S1_at CD407337 - - 3e-20 At1g15270 - C.G. S.X.
0.44 2e-49 196 GmaAffx.75639.1.A1_at AW348123 - - 3e+0 At3g54200 - C.G. S.X.
0.08 6e-7 56 Gma.6219.1.S1_at BQ612268 - - 7e-1 At4g27250 dihydroflavonol 4-reductase family / dihydrokaempferol 4-reductase family C.G. S.X.
0.06 2e-6 54 GmaAffx.83213.2.S1_at BQ628440 - - 3e+0 At4g26230 60S ribosomal protein L31 (RPL31B) C.G. S.X.
0.04 2e-6 54 GmaAffx.79656.1.S1_at AW349529 - - 2e-1 At1g05260 RCI3 (RARE COLD INDUCIBLE GENE 3) C.G. S.X.
0.06 2e-6 54 GmaAffx.60589.1.S1_at BQ627713 - - 3e+0 At4g35710 unknown protein C.G. S.X.
0.05 2e-6 54 Gma.13046.1.S1_at CD397542 - - 4e-7 At3g03270 universal stress protein (USP) family protein / early nodulin ENOD18 family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.32 3e-20 99 Arabidopsis thaliana At1g15270 838094 - F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MFPO - - - C.G. S.X.
0.10 3e-6 52 Hordeum vulgare Contig18255_at Contig18255 - - 1e+1 At2g43255 unknown protein C.G. S.X.
0.14 2e-1 38 Oryza sativa Os02g0159300 9630.m00575 - - 7e-9 At1g15270 - C.G. S.X.
0.20 5e-41 169 Populus trichocarpa Ptp.2263.1.S1_s_at CV272257 hypothetical protein - 2e-27 At1g15270 - C.G. S.X.
0.07 3e-5 50 Triticum aestivum TaAffx.87002.1.S1_at CA597435 - - 3e+0 At4g35070 - C.G. S.X.
0.19 1e-13 75 Vitis vinifera 1620076_s_at CA809762 hypothetical protein LOC100254960 - 6e-15 At1g15270 - C.G. S.X.
0.13 2e-10 65 Zea mays Zm.1546.2.S1_a_at CB411210 hypothetical protein LOC100278775 - 3e-4 At1g15270 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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