Gene omics information

Query gene ID Gma.10782.1.S1_s_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.6Gma.10782.1.S1_s_atCD410674--0At1g56070LOS1S.X.H.G.
0.7388.9Gma.3820.1.S1_atAW156783--9e-34At1g30230elongation factor 1-beta / EF-1-betaS.X.H.G.
0.7388.9Gma.317.1.S1_s_atCD416707--3e-49At2g4184040S ribosomal protein S2 (RPS2C)S.X.H.G.
0.5778.8Gma.4208.2.S1_x_atCD401340--2e-34At1g22780PFL (POINTED FIRST LEAVES)S.X.H.G.
0.5071.7GmaAffx.51048.1.S1_s_atBM521698--6e-5At1g29150ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)S.X.H.G.
0.3650.8Gma.11219.1.S1_s_atCD395846--1e-16At1g1593040S ribosomal protein S12 (RPS12A)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
3.396.2GSM182029Laser capture microdissected (LCM) embryo proper at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stage
3.296.0GSM309531storage protein suppression expt, RNAi biol rep2, tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean Cotyledons
3.195.8GSM201130Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 3GSE7511Expression data from soybean seed compartments with embryos at the heart stage
3.195.8GSM237069Soy_shoot apical meristem2GSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristem
3.095.6GSM29237347_C104.1F.R9F3P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
2.995.4GSM191080Soybean_Cotyledon_ES2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stage
2.895.1GSM309528storage protein suppression expt, control tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean Cotyledons
2.895.1GSM182030Laser capture microdissected (LCM) embryo proper at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stage
2.895.1GSM267288Axillary meristem from 10-day-old soybean seedlings repliacte 2GSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristem
2.895.1GSM2931485_1147.1O.R093U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9805281Gma.10782.1.S1_atCD410674--0At1g56070LOS1C.G.S.X.
0.9805281Gma.10782.1.S1_x_atCD410674--0At1g56070LOS1C.G.S.X.
0.3901298GmaAffx.91918.1.S1_atCF807643--4e-149At1g56070LOS1C.G.S.X.
0.260718GmaAffx.93348.1.S1_atCF809073--3e-59At1g56070LOS1C.G.S.X.
0.260718GmaAffx.93348.1.S1_x_atCF809073--3e-59At1g56070LOS1C.G.S.X.
0.260718GmaAffx.93348.1.S1_s_atCF809073--3e-59At1g56070LOS1C.G.S.X.
0.223e-141504GmaAffx.92255.1.S1_atCF807980--8e-1At2g04045-C.G.S.X.
0.085e-72274GmaAffx.73292.1.S1_atBI893231--1e-14At1g56070LOS1C.G.S.X.
0.051e-759PsAffx.CL1Contig42_atPsAffx.CL1Contig42--1e-8At1g56070LOS1C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.7401362Arabidopsis thalianaAt1g56070842058LOS1encodes a translation elongation factor 2-like protein that is involved in cold-induced translation. Mutations in this gene specifically blocks low temperature-induced transcription of cold-responsive genes but induces the expression of CBF genes and mutants carrying the recessive mutations fail to acclimate to cold and is freezing sensitive.---C.G.S.X.
0.690864Hordeum vulgareContig901_x_atContig901--0At1g56070LOS1C.G.S.X.
0.680952Oryza sativaOs02g0519900AK100313.1-Elongation factor EF-2 (Fragment)0At1g56070LOS1C.G.S.X.
0.7201707Populus trichocarpaPtpAffx.205282.1.S1_atpmrna10471hypothetical protein-0At1g56070LOS1C.G.S.X.
0.621e-124448Triticum aestivumTa.28016.1.S1_x_atBJ250194--0At1g56070LOS1C.G.S.X.
0.430835Vitis vinifera1615787_atBQ797242similar to elongation factor 2-2e-168At1g56070LOS1C.G.S.X.
0.662e-170599Zea maysZm.14407.2.S1_atAW424519hypothetical protein LOC100272648-3e-140At1g56070LOS1C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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