CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Gma.10528.1.S1_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.57 78.8 Gma.10528.1.S1_at BM270365 - - 6e-25 At1g71350 eukaryotic translation initiation factor SUI1 family protein S.X. H.G.
0.46 65.5 GmaAffx.64556.1.S1_at BU549363 - - 6e-28 At5g49880 mitotic checkpoint family protein S.X. H.G.
0.42 59.3 Gma.3544.1.S1_at CD393919 - - 1e-30 At1g25350 OVA9 (ovule abortion 9) S.X. H.G.
0.40 57.1 GmaAffx.63439.1.S1_at BQ628576 - - 3e-34 At1g01510 AN (ANGUSTIFOLIA) S.X. H.G.
0.29 39.0 Gma.4932.1.S1_at BI970670 NDX1 homeobox protein - 2e-5 At4g03090 sequence-specific DNA binding / transcription factor S.X. H.G.
0.20 25.1 Gma.3926.1.S1_at BE801733 - - 2e-38 At1g04080 PRP39 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
7.1 98.8 GSM258502 Vegetative shoot apical meristem, replicate B GSE10251 Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
7.0 98.8 GSM237068 Soy_shoot apical meristem GSE10607 Genome-wide analysis of gene expression in the soybean shoot apical meristem
6.1 98.5 GSM258503 Soybean shoot apical meristem, 2 short-day replicate B GSE10251 Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
5.9 98.5 GSM267288 Axillary meristem from 10-day-old soybean seedlings repliacte 2 GSE10607 Genome-wide analysis of gene expression in the soybean shoot apical meristem
5.3 98.2 GSM258497 Soybean Shoot Apical Meristem, 1 short-day treatment GSE10251 Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
5.2 98.1 GSM267287 Axillary meristem from 10-day-old soybean seedlings GSE10607 Genome-wide analysis of gene expression in the soybean shoot apical meristem
5.1 98.1 GSM237069 Soy_shoot apical meristem2 GSE10607 Genome-wide analysis of gene expression in the soybean shoot apical meristem
4.6 97.7 GSM258498 Soybean shoot apical meristem, 2 short-day treatment GSE10251 Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
4.5 97.7 GSM292221 15_C026.1B.SLB2P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.4 97.6 GSM258496 Vegetative soybean shoot apical meristem GSE10251 Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 6e-1 36 PsAffx.C9000032_at PsAffx.C9000032 - - 1e+0 At5g42790 PAF1 C.G. S.X.
0.02 6e-1 36 GmaAffx.1811.1.S1_at BU544150 - - 2e-22 At1g29400 AML5 (ARABIDOPSIS MEI2-LIKE PROTEIN 5) C.G. S.X.
0.01 6e-1 36 Gma.46.1.S1_at L28005.1 bZIP transcription factor bZIP52 /// transcription factor bZIP76 - 4e-6 At5g10030 TGA4 (TGACG MOTIF-BINDING FACTOR 4) C.G. S.X.
0.00 2e+0 34 PsAffx.C77000058_at PsAffx.C77000058 - - 1e-3 At2g22430 ATHB6 C.G. S.X.
0.02 2e+0 34 GmaAffx.46387.1.S1_at BU544404 - - 9e-5 At3g59110 protein kinase family protein C.G. S.X.
0.03 2e+0 34 Gma.16145.1.A1_at BE822798 - - 7e-2 At2g18390 TTN5 (TITAN 5) C.G. S.X.
0.02 2e+0 34 Gma.15786.1.S1_at CD409217 - - 4e-11 At4g36640 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein C.G. S.X.
0.02 2e+0 34 Gma.11296.1.S1_at BM522997 - - 1e-45 At2g07690 minichromosome maintenance family protein / MCM family protein C.G. S.X.
0.01 9e+0 32 PsAffx.C87000013_at PsAffx.C87000013 - - 6e-4 At3g23890 TOPII (TOPOISOMERASE II) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.21 6e-25 115 Arabidopsis thaliana At1g71350 843476 eukaryotic translation initiation factor SUI1 family protein F:RNA binding, translation initiation factor activity;P:translational initiation;C:unknown;MFOPA - - - C.G. S.X.
0.09 1e-5 50 Hordeum vulgare Contig18044_at Contig18044 - - 1e+0 At3g47070 unknown protein C.G. S.X.
0.05 2e-7 57 Oryza sativa Os02g0557600 CA760647 - Translation initiation factor SUI1 family protein 3e+0 At4g37860 - C.G. S.X.
0.43 1e-35 151 Populus trichocarpa PtpAffx.84152.1.A1_s_at CK097049 hypothetical protein - 1e-22 At1g71350 eukaryotic translation initiation factor SUI1 family protein C.G. S.X.
0.03 7e+0 32 Triticum aestivum TaAffx.78843.1.S1_at CA726254 - - 5e-1 At2g23810 TET8 (TETRASPANIN8) C.G. S.X.
0.24 8e-37 153 Vitis vinifera 1618321_at CB982883 hypothetical protein LOC100260152 - 1e-18 At1g71350 eukaryotic translation initiation factor SUI1 family protein C.G. S.X.
0.09 5e-2 38 Zea mays ZmAffx.453.1.S1_at AI677167 - - 1e-2 At1g71350 eukaryotic translation initiation factor SUI1 family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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