CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Gma.10261.1.S1_at

Gene name

Organism Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.6 Gma.10261.1.S1_at BG839311 - - 2e-52 At3g27090 - S.X. H.G.
0.60 80.7 Gma.10802.1.S1_a_at BI969275 Clone GMFP1 isoprenylated protein - 4e-12 At3g44110 ATJ3 S.X. H.G.
0.60 80.7 Gma.8407.1.S1_at AW348317 ADP-ribosylation factor - 9e-120 At2g47170 ARF1A1C S.X. H.G.
0.60 80.7 Gma.8407.1.S1_x_at AW348317 ADP-ribosylation factor - 9e-120 At2g47170 ARF1A1C S.X. H.G.
0.50 71.7 GmaAffx.22482.1.S1_at AW185059 - - 1e-28 At3g46460 UBC13 (ubiquitin-conjugating enzyme 13) S.X. H.G.
0.44 63.3 GmaAffx.22482.1.S1_x_at AW185059 - - 1e-28 At3g46460 UBC13 (ubiquitin-conjugating enzyme 13) S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.5 97.7 GSM292890 65_C202.1L.R9L1P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.3 97.5 GSM293548 62_3010.2A.R9A2P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.3 97.5 GSM293240 28_1208.1P.R128P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.0 97.2 GSM293911 5_2236.2E.R249P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.0 97.2 GSM293289 72_1238.1P.R145P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9 97.1 GSM293744 77_2114.2C.R285P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9 97.1 GSM293497 16_2018.2A.R245P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8 97.0 GSM293269 54_1534.1P.R026P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8 97.0 GSM293247 34_C066.1P.R9P2P, Experimental replicate 1 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7 96.8 GSM294133 87_2304.2G.R142P, Experimental replicate 2 GSE11611 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.59 0 755 GmaAffx.90031.1.S1_s_at CF805756 - - 8e-1 At1g33810 unknown protein C.G. S.X.
0.12 3e-6 54 Gma.18054.1.S1_at BE023870 N-rich protein - 2e-26 At5g42050 - C.G. S.X.
0.07 7e-4 46 Gma.10950.1.S1_at BI699798 - - 2e-15 At3g27090 - C.G. S.X.
0.03 2e-1 38 GmaAffx.38285.1.S1_at CA801121 - - 5e-2 At3g62260 protein phosphatase 2C, putative / PP2C, putative C.G. S.X.
0.01 7e-1 36 PsAffx.C9000018_at PsAffx.C9000018 - - 1e+0 At5g45920 carboxylesterase/ hydrolase/ hydrolase, acting on ester bonds C.G. S.X.
0.01 3e+0 34 PsAffx.C5000189_at PsAffx.C5000189 - - 1e+0 At4g10895 Expressed protein C.G. S.X.
0.01 3e+0 34 PsAffx.C5000184_at PsAffx.C5000184 - - 2e-1 At2g46220 unknown protein C.G. S.X.
0.02 3e+0 34 HgAffx.8697.1.S1_at CB379804 - - 4e+0 At3g26660 LBD24 (LOB DOMAIN-CONTAINING PROTEIN 24) C.G. S.X.
0.02 3e+0 34 GmaAffx.86190.1.S1_at BU964974 - - 3e-35 At4g09020 ISA3 (ISOAMYLASE 3) C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.39 2e-52 206 Arabidopsis thaliana At3g27090 822327 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPMB - - - C.G. S.X.
0.23 2e-26 119 Hordeum vulgare Contig2458_at Contig2458 - - 1e-20 At3g27090 - C.G. S.X.
0.21 2e-23 111 Oryza sativa Os05g0498700 AK065975.1 - Gda-1 protein 2e-11 At3g27090 - C.G. S.X.
0.34 3e-86 319 Populus trichocarpa PtpAffx.223461.1.S1_at pmrna41486 hypothetical protein - 2e-50 At3g27090 - C.G. S.X.
0.17 6e-16 85 Triticum aestivum Ta.14.1.S1_at BJ263915 - - 3e-25 At3g27090 - C.G. S.X.
0.32 2e-102 371 Vitis vinifera 1614106_at CB972413 hypothetical protein LOC100253249 - 5e-51 At3g27090 - C.G. S.X.
0.22 8e-29 127 Zea mays Zm.13806.1.S1_at AY104790.1 gda-1 - 5e-33 At3g27090 - C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage