CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID EBro08_SQ004_K17_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.88 95.2 EBro08_SQ004_K17_at EBro08_SQ004_K17 - - 6e+0 At5g59840 Ras-related GTP-binding family protein S.X. H.G.
0.50 66.9 Contig6850_at Contig6850 - - 8e-14 At1g74040 IMS1 (2-ISOPROPYLMALATE SYNTHASE 1) S.X. H.G.
0.20 21.1 Contig7298_at Contig7298 - - 6e-13 At4g27700 rhodanese-like domain-containing protein S.X. H.G.
0.19 19.6 Contig6211_at Contig6211 - - 8e-9 At1g04630 MEE4 (maternal effect embryo arrest 4) S.X. H.G.
0.07 5.8 Contig12333_at Contig12333 - - 6e+0 At5g20100 unknown protein S.X. H.G.
0.07 5.8 HVSMEc0007M19r2_at HVSMEc0007M19r2 - - 8e+0 At5g25890 IAA28 (INDOLE-3-ACETIC ACID INDUCIBLE 28) S.X. H.G.
0.03 2.6 Contig11709_at Contig11709 - - 3e-3 At1g22360 AtUGT85A2 (UDP-glucosyl transferase 85A2) S.X. H.G.
0.02 1.8 Contig6858_at Contig6858 - - 9e-7 At5g07720 galactosyl transferase GMA12/MNN10 family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
20.9 99.7 GSM398262 HS41-1_0d_rep2 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
16.3 99.6 GSM398263 HS41-1_0d_rep3 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
15.5 99.6 GSM398264 HS41-1_1d_rep1 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
14.0 99.5 GSM398261 HS41-1_0d_rep1 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
10.0 99.1 GSM282031 Malting_day1_Harrington_rep1 GSE11200 Expression data from malting barley seeds
9.1 98.9 GSM398280 Moroc9-75_3d_rep2 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
8.3 98.8 GSM398276 Moroc9-75_1d_rep1 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
8.1 98.7 GSM398257 Martin_3d_rep3 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
7.9 98.7 GSM398274 Moroc9-75_0d_rep2 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
7.3 98.5 GSM398250 Martin_0d_rep2 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 8e-1 32 Contig6337_at Contig6337 - - 2e+0 At3g10640 VPS60.1 C.G. S.X.
0.01 3e+0 30 Contig8862_at Contig8862 - - 4e+0 At3g21730 dihydroneopterin aldolase family protein C.G. S.X.
0.02 3e+0 30 Contig15303_at Contig15303 - - 6e-1 At3g10860 ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putative C.G. S.X.
0.04 3e+0 30 HV09D03u_at HV09D03u - - 5e+0 At3g14540 terpene synthase/cyclase family protein C.G. S.X.
0.01 3e+0 30 Contig5595_at Contig5595 - - 4e-10 At1g10390 nucleoporin family protein C.G. S.X.
0.01 1e+1 28 Contig6659_s_at Contig6659 - - 5e-21 At1g27980 DPL1 C.G. S.X.
0.02 1e+1 28 Contig21274_at Contig21274 - - 3e-9 At5g07180 ERL2 (ERECTA-LIKE 2) C.G. S.X.
0.04 1e+1 28 Contig5708_at Contig5708 - - 1e+0 At2g47280 pectinesterase C.G. S.X.
0.04 1e+1 28 EBro03_SQ003_E09_at EBro03_SQ003_E09 - - 3e+0 At2g32645 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 6e+0 30 Arabidopsis thaliana At5g59840 836105 Ras-related GTP-binding family protein F:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:plasma membrane;MOFPBVA - - - C.G. S.X.
0.05 9e+0 30 Glycine max HgAffx.17633.1.S1_at CB278757 - - 2e-1 At4g08150 KNAT1 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA) C.G. S.X.
0.05 3e+0 32 Oryza sativa Os12g0162300 9640.m00572 - - 8e-1 At5g54430 universal stress protein (USP) family protein C.G. S.X.
0.05 9e+0 30 Populus trichocarpa PtpAffx.80036.1.S1_at DN503472 hypothetical protein - 5e-11 At3g24140 FMA (FAMA) C.G. S.X.
0.06 2e+0 32 Triticum aestivum Ta.13199.3.S1_x_at CA638141 - - 2e-1 At3g19150 KRP6 (KIP-RELATED PROTEIN 6) C.G. S.X.
0.04 7e+0 28 Vitis vinifera 1621272_at CD802339 hypothetical protein LOC100261869 - 4e+0 At5g50100 - C.G. S.X.
0.06 2e-1 34 Zea mays Zm.4986.3.A1_at AI770643 hypothetical protein LOC100279549 - 7e-26 At5g15490 UDP-glucose 6-dehydrogenase, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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