Gene omics information

Query gene ID	EBro02_SQ008_P15_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.1	EBro02_SQ008_P15_at	EBro02_SQ008_P15	-	-	1e+1	At5g43211	unknown protein	S.X.	H.G.	Please select
0.63	80.3	HVSMEg0002G01r2_x_at	HVSMEg0002G01r2	-	-	6e+0	At5g39360	EDL2 (EID1-like 2)	S.X.	H.G.	Please select
0.56	74.3	V00087.1_at	V00087.1	-	-	3e-1	At5g43525	-	S.X.	H.G.	Please select
0.50	66.9	HS05N06r_at	HS05N06r	-	-	9e-1	At1g79110	protein binding / zinc ion binding	S.X.	H.G.	Please select
0.43	56.4	HA31G21r_at	HA31G21r	-	-	2e+0	At5g17190	unknown protein	S.X.	H.G.	Please select
0.42	55.2	Contig17900_at	Contig17900	-	-	6e+0	At4g05170	DNA binding / transcription factor	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.4	97.5	GSM282031	Malting_day1_Harrington_rep1	GSE11200	Expression data from malting barley seeds
4.2	96.3	GSM68904	27 h salt stressed replicate 1	GSE3097	Barley1 salinity stress study
4.2	96.3	GSM261035	Dicktoo-chilling-rep3	GSE10329	Low temperature stress in cv. Dicktoo
4.1	96.2	GSM261022	ABA-Control-rep2	GSE10328	ABA experiment
3.9	95.8	GSM161148	7% SWC rep3	GSE6990	Barley drought stress
3.8	95.7	GSM261033	Dicktoo-chilling-rep1	GSE10329	Low temperature stress in cv. Dicktoo
3.6	95.3	GSM261021	ABA-Control-rep1	GSE10328	ABA experiment
3.5	95.1	GSM160815	drought control rep3	GSE6990	Barley drought stress
3.4	94.8	GSM261028	ABA-Late-rep2	GSE10328	ABA experiment
3.4	94.8	GSM261036	Dicktoo-subzero-rep1	GSE10329	Low temperature stress in cv. Dicktoo

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	9e-2	36	Contig20802_at	Contig20802	-	-	6e+0	At5g25840	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	32	Contig3510_at	Contig3510	-	-	6e+0	At5g33898	unknown protein	C.G.	S.X.	Please select
0.02	1e+0	32	Contig11188_at	Contig11188	-	-	2e+0	At1g79430	APL (ALTERED PHLOEM DEVELOPMENT)	C.G.	S.X.	Please select
0.02	1e+0	32	Contig10445_at	Contig10445	-	-	4e-2	At1g49400	emb1129 (embryo defective 1129)	C.G.	S.X.	Please select
0.02	1e+0	32	Contig15746_at	Contig15746	-	-	2e+0	At1g73890	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	C.G.	S.X.	Please select
0.02	1e+0	32	Contig6265_at	Contig6265	-	-	2e-3	At3g58990	aconitase C-terminal domain-containing protein	C.G.	S.X.	Please select
0.01	1e+0	32	Contig4291_at	Contig4291	-	-	2e-26	At4g32390	phosphate translocator-related	C.G.	S.X.	Please select
0.03	6e+0	30	Contig6817_at	Contig6817	-	-	2e-2	At3g56910	PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5)	C.G.	S.X.	Please select
0.02	6e+0	30	Contig15980_at	Contig15980	-	-	1e-2	At3g47610	transcription regulator/ zinc ion binding	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	1e+1	30	Arabidopsis thaliana	At5g43211	6240434	unknown protein	F:unknown;P:unknown;C:endomembrane system	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	4e+0	32	Glycine max	HgAffx.17595.1.S1_at	CB278795	-	-	1e+1	At5g67060	HEC1 (HECATE 1)	C.G.	S.X.	Please select
0.04	6e+0	32	Oryza sativa	Os11g0528800	9639.m02957	-	-	3e+0	At4g14358	-	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	2e+1	30	Populus trichocarpa	PtpAffx.76403.1.A1_at	CV232143	hypothetical protein	-	3e+0	At4g19035	LCR7 (Low-molecular-weight cysteine-rich 7)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	3e+0	32	Triticum aestivum	TaAffx.131916.8.S1_at	CA630636	-	-	1e+0	At3g52550	-	C.G.	S.X.	Please select
0.04	8e-1	32	Vitis vinifera	1611451_at	CD801352	hypothetical protein LOC100256535	-	2e-5	At2g44640	-	C.G.	S.X.	Please select
0.04	5e+0	30	Zea mays	Zm.8119.1.A1_at	AY110313.1	acetyltransferase	-	8e-5	At1g03650	GCN5-related N-acetyltransferase (GNAT) family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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