Gene omics information

Query gene ID	EBpi01_SQ002_O15_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.1	EBpi01_SQ002_O15_at	EBpi01_SQ002_O15	-	-	2e+0	At5g47130	Bax inhibitor-1 family / BI-1 family	S.X.	H.G.	Please select
0.61	78.7	Contig5966_at	Contig5966	-	-	9e-2	At4g33360	terpene cyclase/mutase-related	S.X.	H.G.	Please select
0.60	77.3	HW04C21u_at	HW04C21u	-	-	5e+0	At3g56230	speckle-type POZ protein-related	S.X.	H.G.	Please select
0.60	77.3	Contig5763_s_at	Contig5763	C-8,7-sterol isomerase	-	2e+0	At2g14890	AGP9 (ARABINOGALACTAN PROTEIN 9)	S.X.	H.G.	Please select
0.55	72.0	Contig2772_s_at	Contig2772	-	-	4e-50	At5g49910	CPHSC70-2EAT SHOCK PROTEIN 70-2 (CHLOROPLAST HEAT SHOCK PROTEIN 70-2)	S.X.	H.G.	Please select
0.44	58.9	Contig13318_at	Contig13318	-	-	1e-2	At3g59010	pectinesterase family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
12.5	99.4	GSM261032	Dicktoo control-rep3	GSE10329	Low temperature stress in cv. Dicktoo
11.2	99.2	GSM146373	Golden Promise shoot Salt, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
10.8	99.2	GSM261030	Dicktoo-control-rep1	GSE10329	Low temperature stress in cv. Dicktoo
10.6	99.2	GSM71148	OWB-R unstress replicate 1	GSE3170	Barley single feature polymorphisms and drought stress gene expression
10.0	99.1	GSM146372	Golden Promise shoot Salt, biological rep 1	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
10.0	99.1	GSM146378	Maythorpe shoot Salt, biological rep 1	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
9.8	99.1	GSM146374	Golden Promise shoot Salt, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
9.4	99.0	GSM146379	Maythorpe shoot Salt, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
9.3	99.0	GSM146380	Maythorpe shoot Salt, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
9.0	98.9	GSM146369	Golden Promise shoot Control, biological rep1	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e-1	34	Contig6471_at	Contig6471	-	-	7e+0	At5g41570	WRKY24	C.G.	S.X.	Please select
0.02	2e-1	34	Contig8277_at	Contig8277	-	-	2e-8	At3g01150	PTB1 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 1)	C.G.	S.X.	Please select
0.01	9e-1	32	Contig4328_at	Contig4328	-	-	2e-57	At5g35160	-	C.G.	S.X.	Please select
0.01	4e+0	30	Contig10824_at	Contig10824	-	-	7e-2	At5g11350	endonuclease/exonuclease/phosphatase family protein	C.G.	S.X.	Please select
0.04	4e+0	30	HVSMEa0015E13r2_s_at	HVSMEa0015E13r2	-	-	3e+0	At2g10550	-	C.G.	S.X.	Please select
0.03	4e+0	30	HA11H04u_s_at	HA11H04u	-	-	3e-1	At3g53270	unknown protein	C.G.	S.X.	Please select
0.02	4e+0	30	Contig15204_s_at	Contig15204	-	-	6e-7	At1g01800	short-chain dehydrogenase/reductase (SDR) family protein	C.G.	S.X.	Please select
0.02	4e+0	30	Contig15204_at	Contig15204	-	-	6e-7	At1g01800	short-chain dehydrogenase/reductase (SDR) family protein	C.G.	S.X.	Please select
0.02	4e+0	30	Contig13966_at	Contig13966	-	-	4e-2	At3g17900	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	2e+0	32	Arabidopsis thaliana	At5g47130	834759	Bax inhibitor-1 family / BI-1 family	F:unknown;P:negative regulation of apoptosis, anti-apoptosis;C:integral to membrane;BMPOFV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	3e+0	32	Glycine max	GmaAffx.79838.1.A1_at	AI960170	-	-	2e-1	At2g20710	pentatricopeptide (PPR) repeat-containing protein	C.G.	S.X.	Please select
0.06	2e-1	36	Oryza sativa	Os06g0534300	9634.m03233	-	-	2e+0	At5g44495	-	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	3e+0	32	Populus trichocarpa	Ptp.3031.2.A1_at	DN484744	-	-	4e+0	At3g05500	rubber elongation factor (REF) family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	2e+0	32	Triticum aestivum	TaAffx.56155.1.S1_at	CA656564	-	-	1e+1	At5g26070	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please select
0.06	1e-1	34	Vitis vinifera	1619799_at	CK136969.1	-	-	6e-2	At3g27690	LHCB2.3	C.G.	S.X.	Please select
0.04	2e-1	34	Zea mays	Zm.3033.1.S1_at	BU097751	-	-	7e+0	At2g34470	UREG (UREASE ACCESSORY PROTEIN G)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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