Gene omics information

Query gene ID EBem09_SQ005_C08_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8092.5EBem09_SQ005_C08_s_atEBem09_SQ005_C08--1e-1At4g21720unknown proteinS.X.H.G.
0.5572.0Contig19093_s_atContig19093--2e-1At1g47210cyclin family proteinS.X.H.G.
0.5470.3Contig3243_x_atContig3243--6e-4At1g44970peroxidase, putativeS.X.H.G.
0.5369.7Contig4829_atContig4829--1e-14At3g51240F3H (FLAVANONE 3-HYDROXYLASE)S.X.H.G.
0.5268.3Contig18185_atContig18185--5e+0At2g30120unknown proteinS.X.H.G.
0.5167.5Contig2345_s_atContig2345--3e-1At5g0480040S ribosomal protein S17 (RPS17D)S.X.H.G.
0.4863.2HA30O17r_s_atHA30O17r--9e-10At4g3386540S ribosomal protein S29 (RPS29C)S.X.H.G.
0.4661.0Contig16012_atContig16012--3e+0At3g5749040S ribosomal protein S2 (RPS2D)S.X.H.G.
0.4661.0Contig18116_atContig18116--3e-2At1g51090heavy-metal-associated domain-containing proteinS.X.H.G.
0.4458.9Contig26345_atContig26345--6e+0At5g17470calmodulin-related protein, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.998.3GSM238433Embryo 0 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
6.798.3GSM238432Embryo 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
6.398.1GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
6.198.0GSM238416Endosperm 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
5.797.7GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
5.697.7GSM238436Embryo 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
5.597.6GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
4.997.1GSM238430Embryo 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
4.997.1GSM238431Embryo 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
4.796.9GSM238417Endosperm 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.344e-95345Contig1496_atContig1496--3e-5At5g5265040S ribosomal protein S10 (RPS10C)C.G.S.X.
0.035e-236Contig15376_atContig15376--3e+0At4g00730ANL2 (ANTHOCYANINLESS 2)C.G.S.X.
0.025e-236Contig9924_atContig9924--2e-1At3g01470ATHB-1 (ARABIDOPSIS THALIANA HOMEOBOX 1)C.G.S.X.
0.032e-134Contig12427_atContig12427--5e-1At1g12140FMO GS-OX5 (FLAVIN-MONOOXYGENASE GLUCOSINOLATE S-OXYGENASE 5)C.G.S.X.
0.042e-134Contig10759_atContig10759--7e-1At5g15150ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3)C.G.S.X.
0.077e-132HV_CEb0005M21r2_s_atHV_CEb0005M21r2--3e+0At1g15800unknown proteinC.G.S.X.
0.037e-132Contig6310_atContig6310--1e-1At2g41260M17C.G.S.X.
0.047e-132Contig5075_s_atContig5075--5e+0At3g49270unknown proteinC.G.S.X.
0.037e-132Contig3051_s_atContig3051--8e-6At3g11930universal stress protein (USP) family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.091e-136Arabidopsis thalianaAt4g21720828260unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOBVFA---C.G.S.X.
0.124e-238Glycine maxGmaAffx.65929.1.A1_s_atCD414557--7e-1At3g17510CIPK1 (CBL-INTERACTING PROTEIN KINASE 1)C.G.S.X.
0.103e-652Oryza sativaOs04g0430100AB054123.1-Plectin/S10, N-terminal domain containing protein9e-18At4g2574040S ribosomal protein S10 (RPS10A)C.G.S.X.
0.061e-136Populus trichocarpaPtpAffx.202703.1.S1_atpmrna5411hypothetical protein-2e+0At5g03837unknown proteinC.G.S.X.
0.252e-55214Triticum aestivumTa.14409.1.S1_s_atBJ238874--1e-7At4g2574040S ribosomal protein S10 (RPS10A)C.G.S.X.
0.042e+030Vitis vinifera1614581_atCB971440--2e-2At3g23830GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4)C.G.S.X.
0.064e-236Zea maysZm.17271.8.A1_a_atBM340602hypothetical protein LOC100276789-3e-11At5g5265040S ribosomal protein S10 (RPS10C)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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