Gene omics information

Query gene ID EBem08_SQ002_D16_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6077.3EBem08_SQ002_D16_s_atEBem08_SQ002_D16--2e-4At5g60460sec61beta family proteinS.X.H.G.
0.5066.9Contig4268_s_atContig4268--3e-49At5g23250succinyl-CoA ligase (GDP-forming) alpha-chain, mitochondrial, putative / succinyl-CoA synthetase, alpha chain, putative / SCS-alpha, putativeS.X.H.G.
0.5066.9Contig5696_atContig5696--7e-3At5g48335unknown proteinS.X.H.G.
0.4863.2Contig4366_atContig4366--5e-16At5g49810MMTS.X.H.G.
0.4762.2Contig3205_atContig3205--3e-7At4g14710acireductone dioxygenase [iron(II)-requiring]/ metal ion bindingS.X.H.G.
0.3545.1Contig2575_s_atContig2575--2e-1At4g27540PRA1.H (PRENYLATED RAB ACCEPTOR 1.H)S.X.H.G.
0.2835.5Contig3920_atContig3920--3e-21At5g01410RSR4 (REDUCED SUGAR RESPONSE 4)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.096.0GSM146361Golden Promise Root Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.695.3GSM238436Embryo 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
3.695.3GSM282032Malting_day1_Morex_rep1GSE11200Expression data from malting barley seeds
3.595.1GSM238432Embryo 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
3.595.1GSM238433Embryo 0 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
3.294.3GSM382234Root_Hg3GSE15295Mercury toxicity in barley roots
3.294.3GSM238429Embryo 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
3.194.1GSM71142OWB-R stress replicate 1GSE3170 Barley single feature polymorphisms and drought stress gene expression
3.194.1GSM238427Endosperm 72 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
3.194.1GSM282028Malting_day1_Merit_rep1GSE11200Expression data from malting barley seeds
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.706e-154541Contig5466_s_atContig5466--3e-4At5g60460sec61beta family proteinC.G.S.X.
0.706e-154541Contig5466_atContig5466--3e-4At5g60460sec61beta family proteinC.G.S.X.
0.592e-144510HZ42D16r_s_atHZ42D16r--4e-3At5g60460sec61beta family proteinC.G.S.X.
0.592e-144510HZ42D16r_atHZ42D16r--4e-3At5g60460sec61beta family proteinC.G.S.X.
0.371e-56218Contig5465_atContig5465--2e-4At5g60460sec61beta family proteinC.G.S.X.
0.369e-39159HS08H05u_atHS08H05u--2e-4At5g60460sec61beta family proteinC.G.S.X.
0.032e-238Contig15050_atContig15050--2e+0At3g44950glycine-rich proteinC.G.S.X.
0.029e-236Contig12994_atContig12994--4e-5At1g14620DECOY (DECOY)C.G.S.X.
0.039e-236Contig10964_atContig10964--9e-6At1g21790-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.122e-446Arabidopsis thalianaAt5g60460836167sec61beta family proteinF:protein transporter activity;P:protein transport;C:plasma membrane;MFPOB---C.G.S.X.
0.108e-1787Glycine maxGma.5350.1.S1_s_atAW351218--6e-18At5g60460sec61beta family proteinC.G.S.X.
0.326e-43174Oryza sativaOs12g0103300AU222596-Protein transport protein SEC61 beta subunit4e-3At5g60460sec61beta family proteinC.G.S.X.
0.044e+032Populus trichocarpaPtpAffx.9589.1.S1_atCV243148hypothetical protein-6e-2At4g16240unknown proteinC.G.S.X.
0.522e-81301Triticum aestivumTa.13162.1.S1_atCK200289--5e-4At5g60460sec61beta family proteinC.G.S.X.
0.111e-1271Vitis vinifera1620903_atCF605711hypothetical protein LOC100260422-2e-12At5g60460sec61beta family proteinC.G.S.X.
0.282e-42171Zea maysZm.15216.1.A1_atBM335032protein transport protein Sec61 beta subunit-2e-2At5g60460sec61beta family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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