Gene omics information

Query gene ID Contig9918_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7187.1Contig9918_atContig9918--4e-2At2g22540SVP (SHORT VEGETATIVE PHASE)S.X.H.G.
0.5975.8Contig7695_s_atContig7695--1e+0At3g45760unknown proteinS.X.H.G.
0.5572.0Contig6665_s_atContig6665--1e+0At5g37200zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.5066.9Contig15278_atContig15278--1e+0At5g48205zinc ion bindingS.X.H.G.
0.4255.2Contig11840_s_atContig11840--3e-2At2g25720unknown proteinS.X.H.G.
0.1412.9Contig10941_atContig10941--2e-1At3g48340cysteine-type endopeptidase/ cysteine-type peptidaseS.X.H.G.
0.1412.9Contig21329_atContig21329--1e-1At5g47229unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.199.3GSM1611487% SWC rep3GSE6990Barley drought stress
10.699.2GSM16082619% SWC rep3GSE6990Barley drought stress
9.198.9GSM16082319% SWC rep1GSE6990Barley drought stress
7.898.6GSM1608317% SWC rep1GSE6990Barley drought stress
7.898.6GSM146371Golden Promise shoot Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
6.698.2GSM146379Maythorpe shoot Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
6.198.0GSM261028ABA-Late-rep2GSE10328ABA experiment
5.697.7GSM146373Golden Promise shoot Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
5.697.7GSM146378Maythorpe shoot Salt, biological rep 1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
5.297.4GSM146370Golden Promise shoot Control, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.118e-48190Contig4516_atContig4516--5e-11At2g22540SVP (SHORT VEGETATIVE PHASE)C.G.S.X.
0.121e-37157Contig4517_atContig4517--1e-7At2g22540SVP (SHORT VEGETATIVE PHASE)C.G.S.X.
0.093e-29129Contig6501_s_atContig6501--2e+1At5g18540unknown proteinC.G.S.X.
0.031e-25117Contig19417_atContig19417--6e-1At2g33255catalytic/ hydrolase/ phosphoglycolate phosphataseC.G.S.X.
0.074e-25115Contig10649_atContig10649--2e+0At4g13965-C.G.S.X.
0.062e-23109Contig9770_atContig9770--1e-14At4g21160ZACC.G.S.X.
0.091e-22107HU10M16u_atHU10M16u--2e-1At3g24560RSY3 (RASPBERRY 3)C.G.S.X.
0.061e-22107Contig2704_s_atContig2704--9e-1At5g47175LCR3 (Low-molecular-weight cysteine-rich 3)C.G.S.X.
0.081e-22107Contig24911_atContig24911--6e+0At5g26692-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.094e-240Arabidopsis thalianaAt2g22540816787SVP (SHORT VEGETATIVE PHASE)Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter.---C.G.S.X.
0.042e-138Glycine maxPsAffx.C72000038_atPsAffx.C72000038--1e+1At5g58260-C.G.S.X.
0.391e-65252Oryza sativaOs03g0186600AY345222.1-Transcription factor, MADS-box domain containingprotein1e-4At2g22540SVP (SHORT VEGETATIVE PHASE)C.G.S.X.
0.066e-550Populus trichocarpaPtpAffx.4750.1.S1_atAJ767836hypothetical protein-3e-40At2g22540SVP (SHORT VEGETATIVE PHASE)C.G.S.X.
0.7301152Triticum aestivumTa.7339.1.S1_x_atBJ228622MADS-box transcription factor TaAGL13-4e-2At2g22540SVP (SHORT VEGETATIVE PHASE)C.G.S.X.
0.043e-652Vitis vinifera1619977_atBQ794993hypothetical protein LOC100251508-3e-27At2g22540SVP (SHORT VEGETATIVE PHASE)C.G.S.X.
0.318e-54210Zea maysZm.5854.1.S1_atCF245253m20 protein-2e-1At2g22540SVP (SHORT VEGETATIVE PHASE)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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