Gene omics information

Query gene ID Contig9794_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5774.9Contig9794_atContig9794--4e-1At5g61030GR-RBP3 (glycine-rich RNA-binding protein 3)S.X.H.G.
0.5066.9Contig13233_atContig13233--5e-1At2g42260UVI4 (UV-B-INSENSITIVE 4)S.X.H.G.
0.5066.9Contig9793_atContig9793--8e-26At1g61140EDA16 (embryo sac development arrest 16)S.X.H.G.
0.4053.1Contig8904_atContig8904--2e-8At4g19860lecithin:cholesterol acyltransferase family protein / LACT family proteinS.X.H.G.
0.2935.5Contig6837_atContig6837--1e-2At5g59030COPT1 (copper transporter 1)S.X.H.G.
0.1818.2Contig11301_atContig11301--9e-2At3g06420ATG8H (autophagy 8h)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.398.5GSM282026Malting_day1_Legacy_rep4GSE11200Expression data from malting barley seeds
4.696.8GSM282037Malting_day1_Morex_rep2GSE11200Expression data from malting barley seeds
4.196.2GSM261071Albina f-17 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.895.7GSM282036Malting_steeped_Morex_rep2GSE11200Expression data from malting barley seeds
3.695.3GSM282034Malting_steeped_Morex_rep1GSE11200Expression data from malting barley seeds
3.695.3GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seeds
3.494.8GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
3.394.6GSM146377Maythorpe shoot Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.394.6GSM213436Barley seeds with P. aeruginosa PAO1 for 12hrGSE8618P. aeruginosa virulent factor to barley
3.394.6GSM282041Control_dryseed_Morex_rep2GSE11200Expression data from malting barley seeds
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.172e-66252Contig203_atContig203--4e-22At5g59690histone H4C.G.S.X.
0.031e-240HD03I16u_s_atHD03I16u--1e-6At1g02840SR1C.G.S.X.
0.026e-238Contig1913_s_atContig1913--2e-46At3g0920060S acidic ribosomal protein P0 (RPP0B)C.G.S.X.
0.032e-136EBro08_SQ005_E01_atEBro08_SQ005_E01--1e+0At1g14900HMGA (HIGH MOBILITY GROUP A)C.G.S.X.
0.032e-136Contig21644_atContig21644--8e-1At1g06980unknown proteinC.G.S.X.
0.032e-136Contig21644_s_atContig21644--8e-1At1g06980unknown proteinC.G.S.X.
0.032e-136Contig10110_s_atContig10110--4e-4At4g29870-C.G.S.X.
0.032e-136Contig10110_atContig10110--4e-4At4g29870-C.G.S.X.
0.019e-134Contig7590_atContig7590--7e-1At1g55580LAS (Lateral Suppressor)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.064e-136Arabidopsis thalianaAt5g61030836224GR-RBP3 (glycine-rich RNA-binding protein 3)encodes a glycine-rich RNA binding protein. Gene expression is induced by cold.---C.G.S.X.
0.033e-344Glycine maxPsAffx.CL1923Contig1_atPsAffx.CL1923Contig1--1e+0At5g49120senescence-associated protein-relatedC.G.S.X.
0.261e-21105Oryza sativaOs02g0221500AK100904.1-Paraneoplastic encephalomyelitis antigen familyprotein1e-3At5g40490RNA recognition motif (RRM)-containing proteinC.G.S.X.
0.042e-138Populus trichocarpaPtpAffx.47176.1.S1_s_atDN499317--3e-2At1g02840SR1C.G.S.X.
0.481e-118426Triticum aestivumTa.7382.1.S1_a_atCD862833--1e+0At3g13224RNA recognition motif (RRM)-containing proteinC.G.S.X.
0.032e+032Vitis vinifera1621100_atCF516844hypothetical protein LOC100262339-1e+0At5g64310AGP1 (ARABINOGALACTAN PROTEIN 1)C.G.S.X.
0.253e-22105Zea maysZm.6163.1.A1_atAI712204--5e-1At5g46730glycine-rich proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage