Gene omics information

Query gene ID Contig9526_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig9526_atContig9526--2e-6At4g34040zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.5572.0Contig13544_atContig13544--5e-2At1g19300PARVUS (PARVUS)S.X.H.G.
0.5066.9HV_CEa0006M01r2_atHV_CEa0006M01r2--3e-1At2g27750nucleolar matrix protein-relatedS.X.H.G.
0.5066.9Contig8617_s_atContig8617--1e-1At5g4770060S acidic ribosomal protein P1 (RPP1C)S.X.H.G.
0.3849.5Contig1955_s_atContig1955--5e-1At5g17950unknown proteinS.X.H.G.
0.097.4Contig4789_atContig4789--1e-14At5g42790PAF1S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.398.8GSM238419Endosperm 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
7.798.6GSM238418Endosperm 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
6.398.1GSM215731gibberellin treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
6.097.9GSM238417Endosperm 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
5.897.8GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
4.897.0GSM238416Endosperm 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
4.596.7GSM261069Albina f-17 Control rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.096.0GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
3.995.8GSM261068Albina f-17 Control rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.995.8GSM372945genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.065e-548Contig16934_atContig16934--5e-6At4g31450zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.038e-134Contig12810_atContig12810--1e-4At1g73760zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.018e-134Contig10711_atContig10711--2e-4At5g10650zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.028e-134Contig21543_atContig21543--3e-2At1g67690metalloendopeptidaseC.G.S.X.
0.038e-134HVSMEg0010B23r2_x_atHVSMEg0010B23r2--2e-35At3g2339060S ribosomal protein L36a/L44 (RPL36aA)C.G.S.X.
0.038e-134HVSMEg0010B23r2_atHVSMEg0010B23r2--2e-35At3g2339060S ribosomal protein L36a/L44 (RPL36aA)C.G.S.X.
0.028e-134Contig10829_atContig10829--8e+0At5g53720RNA recognition motif (RRM)-containing proteinC.G.S.X.
0.023e+032Contig22563_atContig22563--2e+0At4g21745-C.G.S.X.
0.033e+032HF19N13r_s_atHF19N13r--3e+0At1g24147unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.082e-654Arabidopsis thalianaAt4g34040829550zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFBV---C.G.S.X.
0.066e-446Glycine maxGmaAffx.7280.1.S1_atAW459314--8e-9At4g34040zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.194e-67256Oryza sativaOs04g0648800AK067751.1-Conserved hypothetical protein1e-6At2g15530zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.081e-448Populus trichocarpaPtpAffx.207262.1.S1_atpmrna14406hypothetical protein-1e-5At2g15530zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.051e-138Triticum aestivumTaAffx.85231.1.S1_atCA624590--8e+0At4g35040bZIP transcription factor family proteinC.G.S.X.
0.032e+032Vitis vinifera1616483_atCF517660hypothetical protein LOC100262463-5e+0At5g55650unknown proteinC.G.S.X.
0.301e-54212Zea maysZm.16968.1.S1_atAY106536.1zinc finger, C3HC4 type family protein-2e-3At4g34040zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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