CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig9397_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.86 94.8 Contig9397_at Contig9397 - - 2e-4 At1g22370 AtUGT85A5 (UDP-glucosyl transferase 85A5) S.X. H.G.
0.22 24.2 Contig17771_at Contig17771 - - 2e+0 At1g33030 O-methyltransferase family 2 protein S.X. H.G.
0.11 9.4 rbaal31c07_s_at rbaal31c07 - - 5e+0 At5g04830 unknown protein S.X. H.G.
0.10 8.4 Contig23949_at Contig23949 - - 5e+0 At5g20020 RAN2 S.X. H.G.
0.06 4.8 Contig5838_at Contig5838 - - 1e-1 At5g34940 AtGUS3 (Arabidopsis thaliana glucuronidase 3) S.X. H.G.
0.05 4.1 Contig6496_at Contig6496 - - 7e+0 At4g02000 unknown protein S.X. H.G.
0.03 2.6 Contig17594_at Contig17594 - - 2e+0 At4g11300 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
172.5 100.0 GSM382234 Root_Hg3 GSE15295 Mercury toxicity in barley roots
27.2 99.8 GSM363465 5 mM B(OH)3 treatment (5B) - rep3 GSE14521 Late response to boron toxicity in barley leaves
25.6 99.8 GSM363467 10 mM B(OH)3 treatment (10B) - rep2 GSE14521 Late response to boron toxicity in barley leaves
17.2 99.6 GSM382233 Root_Hg2 GSE15295 Mercury toxicity in barley roots
13.0 99.4 GSM363463 5 mM B(OH)3 treatment (5B) - rep1 GSE14521 Late response to boron toxicity in barley leaves
13.0 99.4 GSM431546 pathogen isolates: Mock - rep1 GSE17238 Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
12.7 99.4 GSM363461 Control (C) - rep2 GSE14521 Late response to boron toxicity in barley leaves
11.6 99.3 GSM71156 Morex stress and unstress replicate 3 GSE3170 Barley single feature polymorphisms and drought stress gene expression
9.4 99.0 GSM215732 gibberellin plus Yariv-reagent treatment rep2 GSE8712 The effects of Yariv-reagent on barley aleurone GA signaling
6.3 98.1 GSM363464 5 mM B(OH)3 treatment (5B) - rep2 GSE14521 Late response to boron toxicity in barley leaves
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.31 9e-172 603 EBro02_SQ001_G03_s_at EBro02_SQ001_G03 - - 8e-1 At5g39730 avirulence-responsive protein-related / avirulence induced gene (AIG) protein-related C.G. S.X.
0.31 9e-172 603 EBro02_SQ001_G03_at EBro02_SQ001_G03 - - 8e-1 At5g39730 avirulence-responsive protein-related / avirulence induced gene (AIG) protein-related C.G. S.X.
0.45 7e-77 287 Contig14823_at Contig14823 - - 8e-1 At1g21350 antioxidant/ oxidoreductase C.G. S.X.
0.45 7e-77 287 Contig14823_s_at Contig14823 - - 8e-1 At1g21350 antioxidant/ oxidoreductase C.G. S.X.
0.17 2e-37 157 HV_CEa0006M01r2_at HV_CEa0006M01r2 - - 3e-1 At2g27750 nucleolar matrix protein-related C.G. S.X.
0.11 4e-32 139 HV12J05u_at HV12J05u - - 1e+0 At3g52360 unknown protein C.G. S.X.
0.20 2e-21 103 Contig14081_at Contig14081 - - 1e-1 At1g22340 AtUGT85A7 (UDP-glucosyl transferase 85A7) C.G. S.X.
0.09 3e-17 89 Contig11709_at Contig11709 - - 3e-3 At1g22360 AtUGT85A2 (UDP-glucosyl transferase 85A2) C.G. S.X.
0.13 8e-12 71 Contig21253_at Contig21253 - - 2e+1 At5g17165 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 2e-4 48 Arabidopsis thaliana At1g22370 838844 AtUGT85A5 (UDP-glucosyl transferase 85A5) F:transferase activity, transferring glycosyl groups, glucuronosyltransferase activity;P:metabolic process;C:unknown;PMVBOF - - - C.G. S.X.
0.03 5e-3 44 Glycine max GmaAffx.59500.3.S1_at BG790368 - - 2e+0 At5g57181 unknown protein C.G. S.X.
0.73 0 1255 Oryza sativa Os02g0755900 AK104985.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 8e-1 At1g22340 AtUGT85A7 (UDP-glucosyl transferase 85A7) C.G. S.X.
0.02 3e-1 38 Populus trichocarpa PtpAffx.201283.1.S1_at pmrna2546 hypothetical protein - 1e-3 At4g13850 GR-RBP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2) C.G. S.X.
0.68 0 1304 Triticum aestivum Ta.22589.1.S1_at CA684187 - - 6e-1 At5g57570 - C.G. S.X.
0.03 1e+0 34 Vitis vinifera 1620103_at CF209698 - - 3e+0 At5g64400 - C.G. S.X.
0.09 1e-4 48 Zea mays Zm.13390.1.S1_at AF457982.1 - - 4e+0 At3g01328 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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