Gene omics information

Query gene ID Contig9378_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig9378_atContig9378--6e-10At3g16100ATRABG3C (ARABIDOPSIS RAB GTPASE HOMOLOG G3C)S.X.H.G.
0.9198.1Contig7103_s_atContig7103--3e-16At3g21430-S.X.H.G.
0.9198.1Contig15036_atContig15036--1e-1At3g07090unknown proteinS.X.H.G.
0.9198.1Contig14821_atContig14821--4e-2At2g27130protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinS.X.H.G.
0.9198.1Contig5185_atContig5185--2e+0At2g41480electron carrier/ heme binding / peroxidaseS.X.H.G.
0.8394.0HU14M07u_s_atHU14M07u--1e+0At5g65050AGL31 (AGAMOUS LIKE MADS-BOX PROTEIN 31)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.098.7GSM431569pathogen isolates: Mock inoculated control - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
7.698.6GSM431548pathogen isolates: Mock - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
7.498.5GSM431572pathogen isolates: Polymyxa betae - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
7.398.5GSM146364Maythorpe Root Control, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
7.298.5GSM146361Golden Promise Root Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
7.298.5GSM431547pathogen isolates: Mock - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
6.898.3GSM146357Golden Promise Root Control, biological rep1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
6.498.1GSM431551pathogen isolates: Polymyxa graminis - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
6.398.1GSM146367Maythorpe Root Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
6.298.0GSM146363Maythorpe Root Control, biological rep1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.171e-52206Contig13308_atContig13308--3e-27At4g09720Ras-related GTP-binding protein, putativeC.G.S.X.
0.172e-48192Contig3880_s_atContig3880--8e-52At3g16100ATRABG3C (ARABIDOPSIS RAB GTPASE HOMOLOG G3C)C.G.S.X.
0.151e-43176Contig3882_s_atContig3882--2e-68At3g18820ATRAB7B (ARABIDOPSIS RAB GTPASE HOMOLOG G3F)C.G.S.X.
0.153e-41169Contig3883_atContig3883--8e-43At3g18820ATRAB7B (ARABIDOPSIS RAB GTPASE HOMOLOG G3F)C.G.S.X.
0.105e-1891Contig3881_atContig3881--2e-21At3g16100ATRABG3C (ARABIDOPSIS RAB GTPASE HOMOLOG G3C)C.G.S.X.
0.047e-238Contig21862_atContig21862--1e-10At1g07410ATRABA2B (ARABIDOPSIS RAB GTPASE HOMOLOG A2B)C.G.S.X.
0.037e-238HVSMEn0024C13r2_atHVSMEn0024C13r2--1e-1At4g29540bacterial transferase hexapeptide repeat-containing proteinC.G.S.X.
0.023e-136Contig9130_atContig9130--2e-4At1g01940peptidyl-prolyl cis-trans isomerase cyclophilin-type family proteinC.G.S.X.
0.001e+034Contig7937_s_atContig7937--1e-3At5g11720alpha-glucosidase 1 (AGLU1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.186e-1065Arabidopsis thalianaAt3g16100820855ATRABG3C (ARABIDOPSIS RAB GTPASE HOMOLOG G3C)F:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:plasma membrane, nucleus;MOFPBVA---C.G.S.X.
0.205e-42173Glycine maxPsAffx.CL158Contig1_atPsAffx.CL158Contig1--7e-6At3g18820ATRAB7B (ARABIDOPSIS RAB GTPASE HOMOLOG G3F)C.G.S.X.
0.441e-92341Oryza sativaOs05g0536900AK105140.1-Ras-related protein Rab78e-15At3g18820ATRAB7B (ARABIDOPSIS RAB GTPASE HOMOLOG G3F)C.G.S.X.
0.194e-1583Populus trichocarpaPtp.4203.1.S1_s_atCX168606hypothetical protein-2e-45At4g09720Ras-related GTP-binding protein, putativeC.G.S.X.
0.670775Triticum aestivumTa.21047.1.S1_atCA648363--6e-7At1g22740RABG3BC.G.S.X.
0.082e-1685Vitis vinifera1621416_atCF514904hypothetical protein LOC100263998-5e-94At1g49300RABG3E (RAB GTPASE HOMOLOG G3E)C.G.S.X.
0.219e-35147Zea maysZm.17586.1.S1_atAW054131hypothetical protein LOC100193973-1e-27At1g22740RABG3BC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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