Gene omics information

Query gene ID Contig9311_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6178.7Contig9311_atContig9311--5e+0At5g01880zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.6380.3Contig20268_atContig20268--4e-1At5g12140ATCYS1 (A. thaliana cystatin-1)S.X.H.G.
0.6077.3Contig4560_atContig4560--2e-1At1g29000heavy-metal-associated domain-containing proteinS.X.H.G.
0.5572.0Contig12905_atContig12905--2e+0At1g13400NUB (NUBBIN)S.X.H.G.
0.5066.9Contig23295_atContig23295--5e+0At3g10720pectinesterase, putativeS.X.H.G.
0.2935.5HV_CEa0008P09r2_s_atHV_CEa0008P09r2--1e+0At5g35520MIS12 (MINICHROMOSOME INSTABILITY 12 (MIS12)-LIKE)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.199.1GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
9.399.0GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
7.698.6GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
7.598.6GSM382235Root_Control1GSE15295Mercury toxicity in barley roots
6.598.2GSM238418Endosperm 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
6.598.2GSM238414Endosperm 8DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
6.398.1GSM238426Endosperm 72 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
5.497.5GSM431572pathogen isolates: Polymyxa betae - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
5.497.5GSM431569pathogen isolates: Mock inoculated control - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
4.796.9GSM431548pathogen isolates: Mock - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-446Contig3802_atContig3802--3e-76At5g11770NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrialC.G.S.X.
0.031e-240Contig13864_atContig13864--9e-2At3g60590unknown proteinC.G.S.X.
0.024e-238Contig3519_atContig3519cytosolic glutathione reductase-2e-11At3g24170ATGR1 (glutathione-disulfide reductase)C.G.S.X.
0.032e-136Contig1433_atContig1433--2e-46At5g53300UBC10 (ubiquitin-conjugating enzyme 10)C.G.S.X.
0.012e-136Contig8088_atContig8088--6e-5At4g35920MCA1 (mid1-complementing activity 1)C.G.S.X.
0.032e-136Contig11939_atContig11939--5e-3At5g58110ATPase activator/ chaperone bindingC.G.S.X.
0.032e-136EBro08_SQ005_I06_atEBro08_SQ005_I06--4e+0At5g59440ZEU1 (ZEUS1)C.G.S.X.
0.012e-136Contig5420_atContig5420--1e-6At2g35780scpl26 (serine carboxypeptidase-like 26)C.G.S.X.
0.026e-134Contig12807_atContig12807--3e+0At3g14595unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e+032Arabidopsis thalianaAt5g01880831691zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVB---C.G.S.X.
0.035e-136Glycine maxPsAffx.psZS008xF10f_s_atPsAffx.psZS008xF10f--8e-2At4g28300hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.115e-48192Oryza sativaOs05g0176600AK071760.1-Conserved hypothetical protein1e+0At3g43150unknown proteinC.G.S.X.
0.032e+034Populus trichocarpaPtpAffx.38067.1.A1_atCV227758hypothetical protein-1e-3At5g63480unknown proteinC.G.S.X.
0.770674Triticum aestivumTaAffx.64770.1.A1_atBJ276659--2e-1At1g04778unknown proteinC.G.S.X.
0.036e+030Vitis vinifera1618359_atCB346158--2e+0At5g43990SUVR2C.G.S.X.
0.192e-37155Zea maysZm.5603.1.A1_atCF626554hypothetical protein LOC100276587-6e+0At5g56600PRF3 (PROFILIN 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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