Gene omics information

Query gene ID Contig9255_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7589.5Contig9255_atContig9255--3e+0At3g47620AtTCP14 (TEOSINTE BRANCHED1, CYCLOIDEA and PCF (TCP) 14)S.X.H.G.
0.5572.0HW05D15u_atHW05D15u--1e+0At2g36740SWC2S.X.H.G.
0.2935.5HV11B04u_x_atHV11B04u--6e-2At2g21250mannose 6-phosphate reductase (NADPH-dependent), putativeS.X.H.G.
0.1412.9Contig13056_atContig13056--4e-1At5g61270PIF7 (PHYTOCHROME-INTERACTING FACTOR7)S.X.H.G.
0.097.4HW09D20V_atHW09D20V--7e-2At3g44250CYP71B38S.X.H.G.
0.086.5Contig20885_atContig20885--1e+0At3g015105'-AMP-activated protein kinase beta-1 subunit-relatedS.X.H.G.
0.054.1HVSMEa0012H02f2_atHVSMEa0012H02f2--4e+0At3g02555unknown proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
17.099.6GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
15.299.5GSM431547pathogen isolates: Mock - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
14.099.5GSM431549pathogen isolates: Polymyxa graminis - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
12.499.4GSM431568pathogen isolates: Mock inoculated control - rep1GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
12.299.4GSM431548pathogen isolates: Mock - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
11.099.2GSM431550pathogen isolates: Polymyxa graminis - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
11.099.2GSM431551pathogen isolates: Polymyxa graminis - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
10.999.2GSM382234Root_Hg3GSE15295Mercury toxicity in barley roots
10.899.2GSM431573pathogen isolates: Polymyxa betae - rep3GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
10.899.2GSM382233Root_Hg2GSE15295Mercury toxicity in barley roots
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.379e-48190Contig11307_atContig11307--9e+0At5g02240binding / catalytic/ coenzyme bindingC.G.S.X.
0.144e-1685Contig16950_atContig16950--5e+0At5g09540DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
0.099e-1167HF09B16r_atHF09B16r--5e+0At4g09580-C.G.S.X.
0.028e-238HA11G09u_x_atHA11G09u--9e-1At2g41225unknown proteinC.G.S.X.
0.028e-238HA11G09u_atHA11G09u--9e-1At2g41225unknown proteinC.G.S.X.
0.023e-136Contig3007_s_atContig3007--3e-7At3g10860ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putativeC.G.S.X.
0.013e-136Contig9907_atContig9907--4e-11At1g07410ATRABA2B (ARABIDOPSIS RAB GTPASE HOMOLOG A2B)C.G.S.X.
0.013e-136Contig9907_s_atContig9907--4e-11At1g07410ATRABA2B (ARABIDOPSIS RAB GTPASE HOMOLOG A2B)C.G.S.X.
0.013e-136Contig9906_atContig9906--4e-11At1g07410ATRABA2B (ARABIDOPSIS RAB GTPASE HOMOLOG A2B)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e+034Arabidopsis thalianaAt3g47620823916AtTCP14 (TEOSINTE BRANCHED1, CYCLOIDEA and PCF (TCP) 14)Encodes a transcription factor AtTCP14 that regulates seed germination. AtTCP14 shows elevated expression level just prior to germination. AtTCP14 is predominantly expressed in the vascular tissue of the embryo, and affects gene expression in radicles in a non-cell-autonomous manner.---C.G.S.X.
0.066e-240Glycine maxGmaAffx.89867.1.A1_s_atCK606556--4e-3At4g02850phenazine biosynthesis PhzC/PhzF family proteinC.G.S.X.
0.452e-42174Oryza sativaOs01g0266500AK101084.1-Phenazine biosynthesis PhzC/PhzF protein familyprotein9e+0At5g55570unknown proteinC.G.S.X.
0.063e-1067Populus trichocarpaPtpAffx.209212.1.S1_atpmrna18217hypothetical protein-2e-3At4g02850phenazine biosynthesis PhzC/PhzF family proteinC.G.S.X.
0.630874Triticum aestivumTaAffx.108876.1.S1_atCA684367--2e+0At4g05350zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.022e-136Vitis vinifera1612828_atBQ799707hypothetical protein LOC100241128-3e-14At3g60340palmitoyl protein thioesterase family proteinC.G.S.X.
0.351e-59230Zea maysZm.8760.1.S1_atCK827613phenazine biosynthesis protein-7e-4At4g02860catalyticC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage