CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig9031_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 87.1 Contig9031_at Contig9031 - - 2e-4 At5g18270 ANAC087 S.X. H.G.
0.73 88.7 Contig2425_s_at Contig2425 - - 2e+0 At5g06900 CYP93D1 S.X. H.G.
0.67 84.7 Contig25583_at Contig25583 - - 2e+0 At4g33520 PAA1 (P-TYPE ATP-ASE 1) S.X. H.G.
0.61 78.7 HVSMEl0003A05r2_at HVSMEl0003A05r2 - - 1e+0 At3g59320 integral membrane protein, putative S.X. H.G.
0.59 75.8 Contig8372_at Contig8372 - - 1e+0 At3g27960 kinesin light chain-related S.X. H.G.
0.50 66.9 Contig5032_at Contig5032 - - 4e-1 At4g38210 ATEXPA20 (ARABIDOPSIS THALIANA EXPANSIN A20) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
18.3 99.7 GSM440974 Stressed awn_Rep3 GSE17669 Gene expression in the barley spike during drought stress
15.0 99.5 GSM440973 Stressed awn_Rep2 GSE17669 Gene expression in the barley spike during drought stress
13.9 99.5 GSM261071 Albina f-17 Hardened rep1 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
13.7 99.5 GSM440972 Stressed awn_Rep1 GSE17669 Gene expression in the barley spike during drought stress
8.1 98.7 GSM363461 Control (C) - rep2 GSE14521 Late response to boron toxicity in barley leaves
7.7 98.6 GSM372951 genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
7.5 98.6 GSM440962 Stressed lemma_Rep3 GSE17669 Gene expression in the barley spike during drought stress
7.1 98.4 GSM440961 Stressed lemma_Rep2 GSE17669 Gene expression in the barley spike during drought stress
6.6 98.2 GSM261072 Albina f-17 Hardened rep2 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.3 98.1 GSM161148 7% SWC rep3 GSE6990 Barley drought stress
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.32 4e-140 498 Contig9032_s_at Contig9032 - - 1e+1 At3g24513 - C.G. S.X.
0.45 4e-115 414 Contig24230_at Contig24230 - - 3e-1 At4g21610 LOL2 (LSD ONE LIKE 2) C.G. S.X.
0.14 4e-26 119 Contig9757_at Contig9757 - - 9e-16 At3g04060 anac046 (Arabidopsis NAC domain containing protein 46) C.G. S.X.
0.12 2e-18 93 Contig9284_at Contig9284 - - 3e-18 At3g04060 anac046 (Arabidopsis NAC domain containing protein 46) C.G. S.X.
0.07 2e-9 63 Contig5241_at Contig5241 - - 8e-2 At5g08790 ATAF2 C.G. S.X.
0.11 3e-8 59 Contig6233_at Contig6233 - - 3e-8 At5g08790 ATAF2 C.G. S.X.
0.11 3e-8 59 Contig6233_s_at Contig6233 - - 3e-8 At5g08790 ATAF2 C.G. S.X.
0.04 4e-7 56 Contig14026_at Contig14026 - - 3e-3 At1g01720 ATAF1 C.G. S.X.
0.10 2e-6 54 Contig5723_at Contig5723 - - 5e-3 At3g15170 CUC1 (CUP-SHAPED COTYLEDON1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 2e-4 48 Arabidopsis thaliana At5g18270 831945 ANAC087 F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P - - - C.G. S.X.
0.04 5e-3 44 Glycine max Gma.2702.1.S1_s_at BU762960 NAC domain protein - 3e-15 At5g13180 ANAC083 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 83) C.G. S.X.
0.24 6e-62 240 Oryza sativa Os07g0684800 AK073876.1 - GRAB2 protein 1e-21 At5g18270 ANAC087 C.G. S.X.
0.06 1e-3 46 Populus trichocarpa PtpAffx.209952.1.S1_x_at pmrna19626 NAC domain protein, IPR003441 - 7e-38 At3g15170 CUC1 (CUP-SHAPED COTYLEDON1) C.G. S.X.
0.74 0 843 Triticum aestivum Ta.25611.1.S1_at CD373727 - - 6e-5 At3g04060 anac046 (Arabidopsis NAC domain containing protein 46) C.G. S.X.
0.04 3e-1 36 Vitis vinifera 1609555_at CD719835 hypothetical protein LOC100261123 - 2e-30 At5g08790 ATAF2 C.G. S.X.
0.10 2e-30 133 Zea mays Zm.5914.1.A1_at CA402103 nac4 protein - 4e-12 At3g04060 anac046 (Arabidopsis NAC domain containing protein 46) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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