Gene omics information

Query gene ID Contig9029_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6784.7Contig9029_atContig9029--4e-8At2g40890CYP98A3 (cytochrome P450, family 98, subfamily A, polypeptide 3)S.X.H.G.
0.4053.1Contig3178_s_atContig3178--5e-35At2g27020PAG1S.X.H.G.
0.3849.5Contig8614_atContig8614--1e-14At2g18750calmodulin-binding proteinS.X.H.G.
0.3342.6Contig7686_atContig7686--2e-1At1g60650glycine-rich RNA-binding protein, putativeS.X.H.G.
0.3037.0Contig7219_x_atContig7219--5e-1At1g56360PAP6 (PURPLE ACID PHOSPHATASE 6)S.X.H.G.
0.2935.5Contig9219_atContig9219--1e+1At5g65130AP2 domain-containing transcription factor, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.099.3GSM419976Palea_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spike
12.099.3GSM440964Control palea_Rep2GSE17669Gene expression in the barley spike during drought stress
11.699.3GSM382236Root_Control2GSE15295Mercury toxicity in barley roots
9.899.1GSM382233Root_Hg2GSE15295Mercury toxicity in barley roots
8.898.9GSM431548pathogen isolates: Mock - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
8.598.8GSM382234Root_Hg3GSE15295Mercury toxicity in barley roots
8.598.8GSM431547pathogen isolates: Mock - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
7.898.6GSM419977Palea_Rep3GSE16754Comparative transcriptional profiling of organs of the barley spike
7.898.6GSM440965Control palea_Rep3GSE17669Gene expression in the barley spike during drought stress
7.798.6GSM431571pathogen isolates: Polymyxa betae - rep1GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.045e-652Contig3442_atContig3442--2e-28At2g30490C4H (CINNAMATE-4-HYDROXYLASE)C.G.S.X.
0.033e-446Contig24721_atContig24721--5e+0At2g41990unknown proteinC.G.S.X.
0.021e-344Contig3441_atContig3441--7e-14At2g30490C4H (CINNAMATE-4-HYDROXYLASE)C.G.S.X.
0.035e-342Contig21066_atContig21066--7e+0At5g08050-C.G.S.X.
0.025e-342Contig15513_atContig15513--9e+0At5g27889unknown proteinC.G.S.X.
0.012e-240Contig3869_atContig3869--1e-3At2g17420NTRA (NADPH-DEPENDENT THIOREDOXIN REDUCTASE A)C.G.S.X.
0.028e-238Contig4582_atContig4582--4e-42At2g19830SNF7.2C.G.S.X.
0.028e-238Contig14534_atContig14534--7e-1At1g64930CYP89A7C.G.S.X.
0.028e-238Contig4583_s_atContig4583--8e-27At4g29160SNF7.1C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.074e-859Arabidopsis thalianaAt2g40890818686CYP98A3 (cytochrome P450, family 98, subfamily A, polypeptide 3)encodes coumarate 3-hydroxylase (C3H), a P450-dependent monooxygenase. Involved in lignin biosynthesis and flavonoid biosynthesis. Also affects the biosynthesis of coumarins such as scopoletin and scopolin as a branching-out-pathway from the phenylpropanoid acid level.---C.G.S.X.
0.142e-448Glycine maxGma.5578.4.S1_a_atBE023932cytochrome P450 98A2-9e-13At2g40890CYP98A3 (cytochrome P450, family 98, subfamily A, polypeptide 3)C.G.S.X.
0.500979Oryza sativaOs05g0494000AK099695.1-Cytochrome P450 98A1 (EC 1.14.-.-)2e-5At2g40890CYP98A3 (cytochrome P450, family 98, subfamily A, polypeptide 3)C.G.S.X.
0.087e-1479Populus trichocarpaPtp.1996.1.S1_s_atCK088835cytochrome P450-4e-36At2g40890CYP98A3 (cytochrome P450, family 98, subfamily A, polypeptide 3)C.G.S.X.
0.6101544Triticum aestivumTa.20769.1.S1_x_atCK194353--3e-4At2g40890CYP98A3 (cytochrome P450, family 98, subfamily A, polypeptide 3)C.G.S.X.
0.023e+032Vitis vinifera1617179_atCF414958--2e-1At3g30370-C.G.S.X.
0.488e-159559Zea maysZm.10178.1.A1_atCO522741hypothetical protein LOC100274274-2e+0At3g24820BSD domain-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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