CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig9016_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.59 75.8 Contig9016_at Contig9016 - - 9e-7 At5g22070 unknown protein S.X. H.G.
0.77 90.8 Contig6618_at Contig6618 - - 4e-1 At5g51180 unknown protein S.X. H.G.
0.77 90.8 Contig4157_at Contig4157 - - 1e-25 At1g60780 HAP13 (HAPLESS 13) S.X. H.G.
0.46 61.0 Contig1356_s_at Contig1356 - - 4e+0 At4g02450 glycine-rich protein S.X. H.G.
0.38 49.5 Contig6619_at Contig6619 - - 2e-3 At5g51180 unknown protein S.X. H.G.
0.25 28.9 Contig5753_at Contig5753 - - 3e-1 At1g04501 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
19.1 99.7 GSM363465 5 mM B(OH)3 treatment (5B) - rep3 GSE14521 Late response to boron toxicity in barley leaves
12.0 99.3 GSM363467 10 mM B(OH)3 treatment (10B) - rep2 GSE14521 Late response to boron toxicity in barley leaves
7.6 98.6 GSM372957 genotype: Mla6 - pathogen isolates: K1 - time: 0 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.8 98.3 GSM261074 Albina e-16 Control rep1 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.7 98.3 GSM261070 Albina f-17 Control rep3 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.6 98.2 GSM261075 Albina e-16 Control rep2 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.3 98.1 GSM419972 Lemma_Rep1 GSE16754 Comparative transcriptional profiling of organs of the barley spike
6.3 98.1 GSM440957 Control lemma_Rep1 GSE17669 Gene expression in the barley spike during drought stress
5.4 97.5 GSM363463 5 mM B(OH)3 treatment (5B) - rep1 GSE14521 Late response to boron toxicity in barley leaves
5.3 97.4 GSM261076 Albina e-16 Control rep3 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 4e-4 46 Contig13558_at Contig13558 - - 2e-1 At2g36270 ABI5 (ABA INSENSITIVE 5) C.G. S.X.
0.01 3e-2 40 Contig8194_at Contig8194 - - 2e-7 At4g37210 tetratricopeptide repeat (TPR)-containing protein C.G. S.X.
0.02 1e-1 38 Contig15497_at Contig15497 - - 7e+0 At5g62576 unknown protein C.G. S.X.
0.02 1e-1 38 Contig23393_at Contig23393 - - 3e-1 At1g54410 dehydrin family protein C.G. S.X.
0.02 1e-1 38 Contig13287_at Contig13287 - - 1e+0 At1g43320 unknown protein C.G. S.X.
0.01 1e-1 38 Contig4268_s_at Contig4268 - - 3e-49 At5g23250 succinyl-CoA ligase (GDP-forming) alpha-chain, mitochondrial, putative / succinyl-CoA synthetase, alpha chain, putative / SCS-alpha, putative C.G. S.X.
0.01 4e-1 36 Contig3718_s_at Contig3718 - - 2e-9 At3g25690 CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1) C.G. S.X.
0.02 4e-1 36 Contig15436_at Contig15436 - - 7e+0 At4g02580 NADH-ubiquinone oxidoreductase 24 kDa subunit, putative C.G. S.X.
0.01 4e-1 36 Contig3360_at Contig3360 - - 2e+0 At1g47960 C/VIF1 (CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 9e-7 56 Arabidopsis thaliana At5g22070 832268 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POB - - - C.G. S.X.
0.05 3e-10 67 Glycine max Gma.7553.1.S1_at BI498776 - - 7e-9 At5g22070 unknown protein C.G. S.X.
0.33 2e-33 145 Oryza sativa Os07g0158800 AK106452.1 - Arabidopsis protein of unknown function DUF266family protein 3e-3 At5g22070 unknown protein C.G. S.X.
0.02 5e+0 34 Populus trichocarpa PtpAffx.85937.1.A1_s_at CV229820 hypothetical protein - 5e-2 At5g03995 unknown protein C.G. S.X.
0.37 3e-90 333 Triticum aestivum TaAffx.55974.1.S1_at CK163595 - - 5e+0 At1g53060 legume lectin family protein C.G. S.X.
0.02 1e+0 34 Vitis vinifera 1622578_at CA812344 - - 1e-3 At5g42300 UBL5 (UBIQUITIN-LIKE PROTEIN 5) C.G. S.X.
0.02 4e-1 36 Zea mays Zm.6225.1.A1_at CB251995 hypothetical protein LOC100274530 - 1e-10 At1g23290 RPL27AB C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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